Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 KRT18P31-201ENST00000506277 1292 ntBASIC18.79■□□□□ 0.6
CISHQ9NSE2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 AD001527.2-201ENST00000622994 785 ntBASIC18.79■□□□□ 0.6
CISHQ9NSE2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
CISHQ9NSE2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CISHQ9NSE2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 AL353593.2-201ENST00000602529 1483 ntBASIC18.78■□□□□ 0.6
CISHQ9NSE2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 IGHV3-52-201ENST00000519770 353 ntBASIC18.78■□□□□ 0.6
CISHQ9NSE2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 AL732292.2-201ENST00000609649 430 ntBASIC18.78■□□□□ 0.6
CISHQ9NSE2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
CISHQ9NSE2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CISHQ9NSE2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 PP12613-201ENST00000424958 2230 ntBASIC18.77■□□□□ 0.6
CISHQ9NSE2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 AC091304.2-201ENST00000564639 760 ntBASIC18.77■□□□□ 0.6
CISHQ9NSE2 AC111152.3-201ENST00000569699 673 ntBASIC18.77■□□□□ 0.6
CISHQ9NSE2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CISHQ9NSE2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
CISHQ9NSE2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.77■□□□□ 0.6
CISHQ9NSE2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.77■□□□□ 0.59
CISHQ9NSE2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CISHQ9NSE2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CISHQ9NSE2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CISHQ9NSE2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CISHQ9NSE2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms