Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC005336.2-201ENST00000593183 939 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AL138831.2-201ENST00000606564 490 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 AL645608.8-201ENST00000606034 2086 ntBASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 TSSC2-201ENST00000450217 709 ntBASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 AC016734.2-201ENST00000624325 1377 ntBASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MS4A4EQ96PG1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
MS4A4EQ96PG1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MS4A4EQ96PG1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MS4A4EQ96PG1 CROCCP2-202ENST00000412962 2773 ntBASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 SIRPAP1-201ENST00000448467 1770 ntBASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MS4A4EQ96PG1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms