Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AC003669.1-201ENST00000334569 611 ntBASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 KLF4P1-201ENST00000412782 1185 ntBASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AC008735.5-201ENST00000623544 497 ntBASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 REXO1L11P-201ENST00000620964 1927 ntBASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 BCL2-203ENST00000589955 5011 ntBASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SWSAP1Q6NVH7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 HCG11-201ENST00000411553 5696 ntBASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 AC092910.1-201ENST00000482027 1129 ntBASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 AC002558.1-201ENST00000488906 803 ntBASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 STK19B-204ENST00000512515 211 ntBASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SWSAP1Q6NVH7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AC012317.2-201ENST00000623305 2251 ntBASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 RPL13AP23-201ENST00000480739 586 ntBASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.6■□□□□ 0.73
SWSAP1Q6NVH7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 LAGE3P1-201ENST00000425356 484 ntBASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 SIGLEC30P-201ENST00000455569 941 ntBASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 AC105339.3-201ENST00000560043 636 ntBASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SWSAP1Q6NVH7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms