Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 AC006557.2-201ENST00000592985 1240 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CLDN2P57739 MIR1199-201ENST00000621445 119 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 AC007613.1-201ENST00000572811 2597 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN2P57739 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CLDN2P57739 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 BX842568.4-201ENST00000421222 227 ntBASIC17.38■□□□□ 0.37
CLDN2P57739 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 DDX43P3-201ENST00000441064 443 ntBASIC17.38■□□□□ 0.37
CLDN2P57739 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN2P57739 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 FAM197Y3-203ENST00000618346 717 ntBASIC17.38■□□□□ 0.37
CLDN2P57739 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN2P57739 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN2P57739 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLDN2P57739 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN2P57739 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLDN2P57739 AC003669.1-201ENST00000334569 611 ntBASIC17.37■□□□□ 0.37
CLDN2P57739 KRT18P3-201ENST00000451602 1288 ntBASIC17.37■□□□□ 0.37
CLDN2P57739 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.37■□□□□ 0.37
CLDN2P57739 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.37■□□□□ 0.37
CLDN2P57739 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.37■□□□□ 0.37
CLDN2P57739 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN2P57739 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN2P57739 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CLDN2P57739 AL589182.2-201ENST00000619332 1049 ntBASIC17.37■□□□□ 0.37
CLDN2P57739 AC005593.1-201ENST00000624894 515 ntBASIC17.37■□□□□ 0.37
CLDN2P57739 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN2P57739 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN2P57739 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN2P57739 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN2P57739 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDN2P57739 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN2P57739 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.36■□□□□ 0.37
CLDN2P57739 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms