Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB5CP51148 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB5CP51148 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 AL139246.5-201ENST00000606645 996 ntBASIC14.21□□□□□ -0.13
RAB5CP51148 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB5CP51148 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB5CP51148 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB5CP51148 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB5CP51148 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
RAB5CP51148 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
RAB5CP51148 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
RAB5CP51148 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB5CP51148 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB5CP51148 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.21□□□□□ -0.14
RAB5CP51148 AC005915.1-201ENST00000624912 2018 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB5CP51148 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 AC022898.2-201ENST00000616822 1312 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB5CP51148 C8orf49-201ENST00000525043 1968 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB5CP51148 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB5CP51148 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB5CP51148 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB5CP51148 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB5CP51148 AC093787.1-201ENST00000450396 207 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB5CP51148 AC231657.2-201ENST00000624556 255 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB5CP51148 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RAB5CP51148 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 LINC02228-204ENST00000642115 2962 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
RAB5CP51148 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 AL163051.1-201ENST00000569214 1512 ntBASIC14.2□□□□□ -0.14
RAB5CP51148 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB5CP51148 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.2□□□□□ -0.14
RAB5CP51148 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB5CP51148 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RAB5CP51148 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB5CP51148 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB5CP51148 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 Z85996.1-201ENST00000494644 937 ntBASIC14.19□□□□□ -0.14
RAB5CP51148 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB5CP51148 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB5CP51148 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB5CP51148 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB5CP51148 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB5CP51148 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB5CP51148 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB5CP51148 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB5CP51148 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms