Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 DDX43P3-201ENST00000441064 443 ntBASIC16.41■□□□□ 0.22
TNFRSF1BP20333 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 AC004263.2-201ENST00000617183 678 ntBASIC16.41■□□□□ 0.22
TNFRSF1BP20333 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFRSF1BP20333 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 AP000523.1-201ENST00000398242 1049 ntBASIC16.4■□□□□ 0.22
TNFRSF1BP20333 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 LYSMD4-203ENST00000378904 2122 ntBASIC16.4■□□□□ 0.22
TNFRSF1BP20333 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFRSF1BP20333 AL391807.1-203ENST00000604392 2365 ntBASIC16.4■□□□□ 0.22
TNFRSF1BP20333 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
TNFRSF1BP20333 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNFRSF1BP20333 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNFRSF1BP20333 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNFRSF1BP20333 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 RASA4DP-201ENST00000460726 1199 ntBASIC16.39■□□□□ 0.21
TNFRSF1BP20333 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TNFRSF1BP20333 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms