Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXC6P09630 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HOXC6P09630 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC6P09630 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC6P09630 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HOXC6P09630 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 AL096828.2-201ENST00000567259 1965 ntBASIC19.81■□□□□ 0.76
HOXC6P09630 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 AL139400.1-201ENST00000366220 510 ntBASIC19.81■□□□□ 0.76
HOXC6P09630 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXC6P09630 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 AC002558.1-201ENST00000488906 803 ntBASIC19.81■□□□□ 0.76
HOXC6P09630 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXC6P09630 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXC6P09630 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 AC106028.4-201ENST00000614509 607 ntBASIC19.81■□□□□ 0.76
HOXC6P09630 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC6P09630 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC6P09630 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC6P09630 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HOXC6P09630 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXC6P09630 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXC6P09630 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXC6P09630 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXC6P09630 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXC6P09630 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC6P09630 AC091812.2-201ENST00000619081 385 ntBASIC19.8■□□□□ 0.76
HOXC6P09630 AC092902.6-201ENST00000641783 218 ntBASIC19.8■□□□□ 0.76
HOXC6P09630 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC6P09630 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
HOXC6P09630 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXC6P09630 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC6P09630 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC6P09630 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXC6P09630 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXC6P09630 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC6P09630 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC6P09630 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HOXC6P09630 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HOXC6P09630 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXC6P09630 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXC6P09630 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HOXC6P09630 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXC6P09630 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
HOXC6P09630 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC6P09630 AC093028.1-201ENST00000622998 982 ntBASIC19.79■□□□□ 0.76
HOXC6P09630 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC6P09630 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HOXC6P09630 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC6P09630 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC6P09630 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms