Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDH17O14917 AC009533.2-201ENST00000543664 586 ntBASIC16.87■□□□□ 0.29
PCDH17O14917 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH17O14917 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDH17O14917 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDH17O14917 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDH17O14917 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCDH17O14917 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH17O14917 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH17O14917 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDH17O14917 LINC00167-201ENST00000530583 1419 ntBASIC16.87■□□□□ 0.29
PCDH17O14917 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH17O14917 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 LINC01126-201ENST00000623515 1646 ntBASIC16.86■□□□□ 0.29
PCDH17O14917 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 MTCL1P1-201ENST00000446207 792 ntBASIC16.86■□□□□ 0.29
PCDH17O14917 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 UNC93B7-201ENST00000509439 705 ntBASIC16.86■□□□□ 0.29
PCDH17O14917 FOSL1P1-201ENST00000511041 816 ntBASIC16.86■□□□□ 0.29
PCDH17O14917 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PCDH17O14917 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH17O14917 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH17O14917 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH17O14917 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH17O14917 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PCDH17O14917 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDH17O14917 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH17O14917 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH17O14917 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDH17O14917 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH17O14917 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms