Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 DDX43P3-201ENST00000441064 443 ntBASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 IGHV3-52-201ENST00000519770 353 ntBASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AL645939.2-201ENST00000427340 991 ntBASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC091812.2-201ENST00000619081 385 ntBASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AC092919.2-201ENST00000623631 1645 ntBASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHAC2Q9Y5I4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 AL590787.1-201ENST00000568856 1315 ntBASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 AC104581.1-202ENST00000635932 2618 ntBASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 AC074386.1-202ENST00000463561 864 ntBASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 AC092902.6-201ENST00000641783 218 ntBASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 PI4KAP1-204ENST00000612579 1703 ntBASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHAC2Q9Y5I4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHAC2Q9Y5I4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHAC2Q9Y5I4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms