Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 AC041040.2-201ENST00000622926 2899 ntBASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AC013268.4-201ENST00000637413 2228 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AC023157.3-201ENST00000619086 2088 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms