Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX27Q96L92 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNX27Q96L92 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX27Q96L92 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX27Q96L92 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.03■□□□□ 0.64
SNX27Q96L92 AL022326.1-202ENST00000641533 845 ntBASIC19.03■□□□□ 0.64
SNX27Q96L92 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX27Q96L92 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNX27Q96L92 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX27Q96L92 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 AC003669.1-201ENST00000334569 611 ntBASIC19.02■□□□□ 0.64
SNX27Q96L92 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX27Q96L92 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX27Q96L92 SLC25A1P1-201ENST00000528351 927 ntBASIC19.02■□□□□ 0.64
SNX27Q96L92 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX27Q96L92 STK25P1-201ENST00000585406 838 ntBASIC19.02■□□□□ 0.64
SNX27Q96L92 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX27Q96L92 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.02■□□□□ 0.64
SNX27Q96L92 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNX27Q96L92 AC243591.1-201ENST00000452967 1364 ntBASIC19.02■□□□□ 0.64
SNX27Q96L92 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX27Q96L92 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX27Q96L92 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SNX27Q96L92 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX27Q96L92 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 NEFHP1-201ENST00000412845 2629 ntBASIC19.02■□□□□ 0.63
SNX27Q96L92 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNX27Q96L92 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
SNX27Q96L92 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 AC004817.3-201ENST00000602957 2129 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 AL390961.4-201ENST00000623958 2535 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 AC148477.5-201ENST00000625164 1645 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX27Q96L92 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX27Q96L92 AL020989.1-201ENST00000422979 469 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 IGHV3-52-201ENST00000519770 353 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 OR7E14P-202ENST00000530490 1290 ntBASIC19.01■□□□□ 0.63
SNX27Q96L92 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX27Q96L92 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX27Q96L92 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNX27Q96L92 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNX27Q96L92 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX27Q96L92 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX27Q96L92 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SNX27Q96L92 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19■□□□□ 0.63
SNX27Q96L92 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SNX27Q96L92 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
SNX27Q96L92 REXO1L11P-201ENST00000620964 1927 ntBASIC19■□□□□ 0.63
SNX27Q96L92 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX27Q96L92 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms