Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 LYSMD4-203ENST00000378904 2122 ntBASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 RBM17P1-201ENST00000453646 1190 ntBASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 AC113404.2-201ENST00000507884 177 ntBASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 AP003071.4-201ENST00000562276 1284 ntBASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 MIR3917-201ENST00000580971 93 ntBASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRTM1Q86UE6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 AC116353.5-201ENST00000638148 1699 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 UNC93B2-201ENST00000285383 730 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 PVRIG2P-201ENST00000435460 978 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ITM2C-210ENST00000620962 501 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 AC010653.2-201ENST00000623505 997 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 FLJ38576-201ENST00000623820 2459 ntBASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM1Q86UE6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM1Q86UE6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms