Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 AC009533.2-201ENST00000543664 586 ntBASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 AC012313.10-201ENST00000623509 926 ntBASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD3Q7Z3D4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD3Q7Z3D4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 NUS1P2-201ENST00000417358 873 ntBASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 PRELID1P1-202ENST00000567272 903 ntBASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD3Q7Z3D4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 AC009053.2-201ENST00000563701 2365 ntBASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 FOSL1P1-201ENST00000511041 816 ntBASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD3Q7Z3D4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 BX276092.7-203ENST00000637198 1536 ntBASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 GNAS-203ENST00000306120 1878 ntBASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 NUS1P1-201ENST00000446295 882 ntBASIC17.74■□□□□ 0.43
LYSMD3Q7Z3D4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms