Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PCP4P48539 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PCP4P48539 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.09□□□□□ -0.47
PCP4P48539 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PCP4P48539 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
PCP4P48539 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
PCP4P48539 LINC01529-204ENST00000636474 1715 ntBASIC12.08□□□□□ -0.47
PCP4P48539 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.08□□□□□ -0.47
PCP4P48539 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
PCP4P48539 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.08□□□□□ -0.48
PCP4P48539 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
PCP4P48539 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
PCP4P48539 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 AC092720.2-201ENST00000602388 1665 ntBASIC12.08□□□□□ -0.48
PCP4P48539 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.08□□□□□ -0.48
PCP4P48539 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PCP4P48539 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC12.08□□□□□ -0.48
PCP4P48539 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PCP4P48539 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PCP4P48539 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
PCP4P48539 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.07□□□□□ -0.48
PCP4P48539 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.07□□□□□ -0.48
PCP4P48539 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
PCP4P48539 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.07□□□□□ -0.48
PCP4P48539 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
PCP4P48539 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
PCP4P48539 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.07□□□□□ -0.48
PCP4P48539 DMBT1P1-203ENST00000636837 4628 ntBASIC12.07□□□□□ -0.48
PCP4P48539 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PCP4P48539 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PCP4P48539 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PCP4P48539 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
PCP4P48539 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.06□□□□□ -0.48
PCP4P48539 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms