Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A2P16615 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A2P16615 AC099343.3-201ENST00000605834 2503 ntBASIC19.53■□□□□ 0.72
ATP2A2P16615 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2A2P16615 PKD1P1-201ENST00000458669 6805 ntBASIC19.53■□□□□ 0.72
ATP2A2P16615 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATP2A2P16615 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A2P16615 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
ATP2A2P16615 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATP2A2P16615 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 LAGE3P1-201ENST00000425356 484 ntBASIC19.52■□□□□ 0.72
ATP2A2P16615 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2A2P16615 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 MIR3197-201ENST00000582241 73 ntBASIC19.52■□□□□ 0.72
ATP2A2P16615 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP2A2P16615 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2A2P16615 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
ATP2A2P16615 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A2P16615 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A2P16615 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A2P16615 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A2P16615 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP2A2P16615 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.52■□□□□ 0.71
ATP2A2P16615 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A2P16615 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A2P16615 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP2A2P16615 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 METTL21AP1-201ENST00000438852 635 ntBASIC19.51■□□□□ 0.71
ATP2A2P16615 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A2P16615 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP2A2P16615 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A2P16615 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 AL031598.1-201ENST00000561511 1773 ntBASIC19.51■□□□□ 0.71
ATP2A2P16615 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A2P16615 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A2P16615 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP2A2P16615 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP2A2P16615 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP2A2P16615 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A2P16615 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ATP2A2P16615 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A2P16615 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.5■□□□□ 0.71
ATP2A2P16615 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ATP2A2P16615 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP2A2P16615 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ATP2A2P16615 PCDHB18P-201ENST00000524813 2368 ntBASIC19.5■□□□□ 0.71
ATP2A2P16615 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP2A2P16615 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP2A2P16615 AL024508.2-201ENST00000607749 1894 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms