Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBB4AP04350 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBB4AP04350 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBB4AP04350 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBB4AP04350 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
TUBB4AP04350 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TUBB4AP04350 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.96■□□□□ 0.63
TUBB4AP04350 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.96■□□□□ 0.62
TUBB4AP04350 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 AC046185.3-201ENST00000623228 1824 ntBASIC18.95■□□□□ 0.62
TUBB4AP04350 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 AC007950.2-201ENST00000615045 2347 ntBASIC18.95■□□□□ 0.62
TUBB4AP04350 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 AC008894.3-201ENST00000624324 3103 ntBASIC18.95■□□□□ 0.62
TUBB4AP04350 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.95■□□□□ 0.62
TUBB4AP04350 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TUBB4AP04350 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 AC005104.2-201ENST00000427818 678 ntBASIC18.95■□□□□ 0.62
TUBB4AP04350 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TUBB4AP04350 CA15P1-201ENST00000481698 905 ntBASIC18.95■□□□□ 0.62
TUBB4AP04350 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TUBB4AP04350 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TUBB4AP04350 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TUBB4AP04350 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.95■□□□□ 0.62
TUBB4AP04350 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TUBB4AP04350 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBB4AP04350 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBB4AP04350 KRT8P9-201ENST00000558927 1449 ntBASIC18.94■□□□□ 0.62
TUBB4AP04350 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.94■□□□□ 0.62
TUBB4AP04350 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TUBB4AP04350 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 AP002982.1-201ENST00000492365 877 ntBASIC18.94■□□□□ 0.62
TUBB4AP04350 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.94■□□□□ 0.62
TUBB4AP04350 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.94■□□□□ 0.62
TUBB4AP04350 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
TUBB4AP04350 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TUBB4AP04350 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TUBB4AP04350 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TUBB4AP04350 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TUBB4AP04350 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TUBB4AP04350 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.93■□□□□ 0.62
TUBB4AP04350 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TUBB4AP04350 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 KRT16P1-201ENST00000399124 1418 ntBASIC18.93■□□□□ 0.62
TUBB4AP04350 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.93■□□□□ 0.62
TUBB4AP04350 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TUBB4AP04350 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TUBB4AP04350 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TUBB4AP04350 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TUBB4AP04350 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms