Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC096633.1-201ENST00000422446 749 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AF238378.1-201ENST00000526806 358 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AL121912.1-201ENST00000603683 238 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC008608.2-201ENST00000606089 416 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ABALON-201ENST00000629058 1903 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 FLJ13224-201ENST00000313737 1514 ntBASIC12.78□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC010460.3-201ENST00000511359 1579 ntBASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-28A0A0C4DH34 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 KRT8P10-201ENST00000450021 1447 ntBASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.77□□□□□ -0.37
IGHV4-28A0A0C4DH34 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IGHV4-28A0A0C4DH34 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms