Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AL359839.1-201ENST00000451975 1160 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC010374.2-201ENST00000512933 535 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 RNU2-45P-201ENST00000516068 187 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 SCARNA1-201ENST00000517138 166 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 LINC00564-201ENST00000567258 1119 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC245884.10-201ENST00000597355 337 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AC012467.1-201ENST00000607740 256 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 AL158212.4-201ENST00000624062 1286 ntBASIC20.58■□□□□ 0.89
RNF216Q9NWF9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF216Q9NWF9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF216Q9NWF9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.57■□□□□ 0.88
RNF216Q9NWF9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TSPY23P-201ENST00000440136 739 ntBASIC20.57■□□□□ 0.88
RNF216Q9NWF9 HCG4P8-203ENST00000443049 980 ntBASIC20.57■□□□□ 0.88
RNF216Q9NWF9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 AC239868.3-201ENST00000577853 1234 ntBASIC20.57■□□□□ 0.88
RNF216Q9NWF9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 AC018645.2-201ENST00000609151 472 ntBASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF216Q9NWF9 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF216Q9NWF9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms