RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 AEBP2Q6ZN18 517 aaPredicted RBP31.61■■■□□ 2.65
LINC01990-201ENST00000609293 CHIC1Q5VXU3 224 aa30.11■■■□□ 2.41
LINC01990-201ENST00000609293 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
LINC01990-201ENST00000609293 PHF23Q9BUL5 403 aaPredicted RBP26.73■■□□□ 1.87
LINC01990-201ENST00000609293 POTEDQ86YR6 584 aa25.46■■□□□ 1.67
LINC01990-201ENST00000609293 FOXD1Q16676 465 aa25.2■■□□□ 1.62
LINC01990-201ENST00000609293 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
LINC01990-201ENST00000609293 MSH5O43196 834 aa24■■□□□ 1.43
LINC01990-201ENST00000609293 PIAS4Q8N2W9 510 aaPredicted RBP23.6■■□□□ 1.37
LINC01990-201ENST00000609293 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
LINC01990-201ENST00000609293 ADRA2BP18089 450 aa23.43■■□□□ 1.34
LINC01990-201ENST00000609293 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
LINC01990-201ENST00000609293 MAPK8IP2Q13387 824 aaPredicted RBP21.51■■□□□ 1.03
LINC01990-201ENST00000609293 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
LINC01990-201ENST00000609293 CACNB1Q02641 598 aaPredicted RBP21.29■■□□□ 1
LINC01990-201ENST00000609293 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
LINC01990-201ENST00000609293 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
LINC01990-201ENST00000609293 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
LINC01990-201ENST00000609293 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
LINC01990-201ENST00000609293 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
LINC01990-201ENST00000609293 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
LINC01990-201ENST00000609293 RNF39Q9H2S5 420 aa20.33■□□□□ 0.85
LINC01990-201ENST00000609293 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
LINC01990-201ENST00000609293 C1QBPQ07021 282 aaKnown RBP19.99■□□□□ 0.79
LINC01990-201ENST00000609293 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
LINC01990-201ENST00000609293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
LINC01990-201ENST00000609293 POTEHQ6S545 545 aa19.72■□□□□ 0.75
LINC01990-201ENST00000609293 KCNA4P22459 653 aa19.49■□□□□ 0.71
LINC01990-201ENST00000609293 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
LINC01990-201ENST00000609293 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
LINC01990-201ENST00000609293 CAPN15O75808 1086 aa19.02■□□□□ 0.63
LINC01990-201ENST00000609293 SLC4A2P04920 1241 aa19■□□□□ 0.63
LINC01990-201ENST00000609293 APLP2Q06481 763 aa18.96■□□□□ 0.63
LINC01990-201ENST00000609293 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
LINC01990-201ENST00000609293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
LINC01990-201ENST00000609293 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
LINC01990-201ENST00000609293 DSG3P32926 999 aa18.85■□□□□ 0.61
LINC01990-201ENST00000609293 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
LINC01990-201ENST00000609293 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
LINC01990-201ENST00000609293 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
LINC01990-201ENST00000609293 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.56
LINC01990-201ENST00000609293 ABCB7O75027 752 aa18.51■□□□□ 0.55
LINC01990-201ENST00000609293 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
LINC01990-201ENST00000609293 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
LINC01990-201ENST00000609293 POLA2Q14181 598 aa18.18■□□□□ 0.5
LINC01990-201ENST00000609293 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.5
LINC01990-201ENST00000609293 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
LINC01990-201ENST00000609293 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
LINC01990-201ENST00000609293 SP7Q8TDD2 431 aaPredicted RBP17.91■□□□□ 0.46
LINC01990-201ENST00000609293 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
LINC01990-201ENST00000609293 ZBTB22O15209 634 aa17.85■□□□□ 0.45
LINC01990-201ENST00000609293 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
LINC01990-201ENST00000609293 ABCC9O60706 1549 aa17.67■□□□□ 0.42
LINC01990-201ENST00000609293 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
LINC01990-201ENST00000609293 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
LINC01990-201ENST00000609293 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
LINC01990-201ENST00000609293 FBLN2P98095 1184 aa17.46■□□□□ 0.39
LINC01990-201ENST00000609293 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
LINC01990-201ENST00000609293 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
LINC01990-201ENST00000609293 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
LINC01990-201ENST00000609293 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
LINC01990-201ENST00000609293 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
LINC01990-201ENST00000609293 HAX1O00165 279 aa17.19■□□□□ 0.34
LINC01990-201ENST00000609293 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
LINC01990-201ENST00000609293 MKRN4PQ13434 485 aaPredicted RBP17.13■□□□□ 0.33
LINC01990-201ENST00000609293 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
LINC01990-201ENST00000609293 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
LINC01990-201ENST00000609293 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
LINC01990-201ENST00000609293 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
LINC01990-201ENST00000609293 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
LINC01990-201ENST00000609293 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
LINC01990-201ENST00000609293 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
LINC01990-201ENST00000609293 EVX2Q03828 476 aa16.85■□□□□ 0.29
LINC01990-201ENST00000609293 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
LINC01990-201ENST00000609293 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC01990-201ENST00000609293 LHX8Q68G74 356 aa16.77■□□□□ 0.28
LINC01990-201ENST00000609293 RB1CC1Q8TDY2 1594 aa16.73■□□□□ 0.27
LINC01990-201ENST00000609293 PRR29P0C7W0 189 aa16.72■□□□□ 0.27
LINC01990-201ENST00000609293 PLSCR2Q9NRY7 297 aa16.69■□□□□ 0.26
LINC01990-201ENST00000609293 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
LINC01990-201ENST00000609293 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
LINC01990-201ENST00000609293 NACADO15069 1562 aa16.53■□□□□ 0.24
LINC01990-201ENST00000609293 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
LINC01990-201ENST00000609293 GABBR2O75899 941 aa16.45■□□□□ 0.22
LINC01990-201ENST00000609293 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
LINC01990-201ENST00000609293 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
LINC01990-201ENST00000609293 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
LINC01990-201ENST00000609293 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
LINC01990-201ENST00000609293 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
LINC01990-201ENST00000609293 CLCN6P51797 869 aa16.23■□□□□ 0.19
LINC01990-201ENST00000609293 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
LINC01990-201ENST00000609293 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
LINC01990-201ENST00000609293 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
LINC01990-201ENST00000609293 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
LINC01990-201ENST00000609293 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
LINC01990-201ENST00000609293 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC01990-201ENST00000609293 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
LINC01990-201ENST00000609293 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
LINC01990-201ENST00000609293 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
LINC01990-201ENST00000609293 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms