Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHAF3Q9NRP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHAF3Q9NRP4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHAF3Q9NRP4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHAF3Q9NRP4 AC125634.1-201ENST00000438758 1403 ntBASIC16.28■□□□□ 0.2
SDHAF3Q9NRP4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 BX276092.7-203ENST00000637198 1536 ntBASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.27■□□□□ 0.2
SDHAF3Q9NRP4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.27■□□□□ 0.19
SDHAF3Q9NRP4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 IGHV3-47-201ENST00000425060 335 ntBASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 NUS1P1-201ENST00000446295 882 ntBASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 AL138831.2-201ENST00000606564 490 ntBASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SDHAF3Q9NRP4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 AC007613.1-201ENST00000572811 2597 ntBASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 AC005336.2-201ENST00000593183 939 ntBASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.25■□□□□ 0.19
SDHAF3Q9NRP4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms