Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-7■■□□□ 13.3
CSTF2TQ9H0L4 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.62e-7■■□□□ 13.3
CSTF2TQ9H0L4 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.612e-7■■□□□ 13.3
CSTF2TQ9H0L4 ACSF3-205ENST00000535176 421 ntTSL 39.06□□□□□ -0.962e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC8.11□□□□□ -1.112e-7■■□□□ 13.3
CSTF2TQ9H0L4 ANKRD17-206ENST00000514252 3259 ntTSL 25.31□□□□□ -1.562e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.08□□□□□ -1.762e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.98□□□□□ -1.932e-7■■□□□ 13.3
CSTF2TQ9H0L4 TBC1D31-215ENST00000524307 3101 ntTSL 22.02□□□□□ -2.092e-7■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-206ENST00000564992 677 ntAPPRIS ALT2 TSL 218.72■□□□□ 0.593e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-203ENST00000563439 642 ntAPPRIS ALT2 TSL 318.47■□□□□ 0.553e-10■■□□□ 13.3
CSTF2TQ9H0L4 TNKS1BP1-202ENST00000427750 1946 ntTSL 218.36■□□□□ 0.533e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.483e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-208ENST00000565645 519 ntTSL 417.04■□□□□ 0.323e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.253e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-207ENST00000565560 579 ntAPPRIS ALT2 TSL 316.42■□□□□ 0.223e-10■■□□□ 13.3
CSTF2TQ9H0L4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.123e-10■■□□□ 13.3
CSTF2TQ9H0L4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.073e-10■■□□□ 13.3
CSTF2TQ9H0L4 TNKS1BP1-204ENST00000528882 4336 ntTSL 514.69□□□□□ -0.063e-10■■□□□ 13.3
CSTF2TQ9H0L4 NOL3-210ENST00000568086 578 ntTSL 414.5□□□□□ -0.093e-10■■□□□ 13.3
CSTF2TQ9H0L4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.362e-15■■□□□ 13.3
CSTF2TQ9H0L4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.962e-7■■□□□ 13.3
CSTF2TQ9H0L4 CCDC92-207ENST00000545037 559 ntTSL 219.52■□□□□ 0.722e-7■■□□□ 13.3
CSTF2TQ9H0L4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.32■□□□□ 0.22e-7■■□□□ 13.3
CSTF2TQ9H0L4 CCDC92-202ENST00000535556 555 ntTSL 410.15□□□□□ -0.782e-7■■□□□ 13.3
CSTF2TQ9H0L4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.7■□□□□ 0.742e-7■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.21■□□□□ 0.351e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.031e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.031e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.171e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-210ENST00000584968 908 ntTSL 513.95□□□□□ -0.181e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-209ENST00000579070 871 ntTSL 313.47□□□□□ -0.251e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.261e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNURF-203ENST00000580062 796 ntTSL 313.22□□□□□ -0.291e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.451e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.631e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-204ENST00000400098 525 ntTSL 48.29□□□□□ -1.081e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.11e-6■■□□□ 13.3
CSTF2TQ9H0L4 SNRPN-206ENST00000553597 849 ntTSL 37.44□□□□□ -1.221e-6■■□□□ 13.3
CSTF2TQ9H0L4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.261e-6■■□□□ 13.3
CSTF2TQ9H0L4 AC124312.1-202ENST00000557230 669 ntAPPRIS ALT2 TSL 56.72□□□□□ -1.331e-6■■□□□ 13.3
CSTF2TQ9H0L4 KLHL22-211ENST00000490556 708 ntTSL 314.06□□□□□ -0.162e-6■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-206ENST00000504033 578 ntTSL 514.64□□□□□ -0.072e-7■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.472e-7■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-204ENST00000502248 670 ntTSL 1 (best)10.26□□□□□ -0.772e-7■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-222ENST00000514374 574 ntTSL 47.64□□□□□ -1.192e-7■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.22e-7■■□□□ 13.3
CSTF2TQ9H0L4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.232e-7■■□□□ 13.3
CSTF2TQ9H0L4 CCNK-204ENST00000555049 1606 ntTSL 1 (best) BASIC10.03□□□□□ -0.89e-9■■□□□ 13.3
CSTF2TQ9H0L4 CCNK-203ENST00000553865 5627 ntTSL 1 (best)8.67□□□□□ -1.029e-9■■□□□ 13.3
CSTF2TQ9H0L4 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.069e-9■■□□□ 13.3
CSTF2TQ9H0L4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.91□□□□□ -0.181e-6■■□□□ 13.3
CSTF2TQ9H0L4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.38e-7■■□□□ 13.3
CSTF2TQ9H0L4 CDK3-204ENST00000588812 570 ntTSL 310.26□□□□□ -0.778e-7■■□□□ 13.3
CSTF2TQ9H0L4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.32■□□□□ 0.044e-8■■□□□ 13.3
CSTF2TQ9H0L4 CSNK2A1-206ENST00000608066 577 ntTSL 413.87□□□□□ -0.194e-8■■□□□ 13.3
CSTF2TQ9H0L4 CSNK2A1-205ENST00000460062 552 ntTSL 413.87□□□□□ -0.194e-8■■□□□ 13.3
CSTF2TQ9H0L4 CSNK2A1-209ENST00000609606 589 ntTSL 213.87□□□□□ -0.194e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -03e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.87□□□□□ -0.033e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.87□□□□□ -0.033e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.81□□□□□ -0.043e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.76□□□□□ -0.053e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.073e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.64□□□□□ -0.233e-8■■□□□ 13.3
CSTF2TQ9H0L4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.63□□□□□ -0.233e-8■■□□□ 13.3
CSTF2TQ9H0L4 POR-212ENST00000447222 2332 ntTSL 515.44■□□□□ 0.067e-7■■□□□ 13.3
CSTF2TQ9H0L4 POR-216ENST00000454934 2295 ntTSL 315.32■□□□□ 0.047e-7■■□□□ 13.3
CSTF2TQ9H0L4 POR-202ENST00000412064 1044 ntTSL 512.71□□□□□ -0.377e-7■■□□□ 13.3
CSTF2TQ9H0L4 POR-208ENST00000432753 561 ntTSL 411.34□□□□□ -0.597e-7■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-206ENST00000469704 696 ntTSL 325■■□□□ 1.592e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.12e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-204ENST00000431277 840 ntTSL 515.01□□□□□ -0.012e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-214ENST00000490175 2025 ntTSL 1 (best)14.55□□□□□ -0.082e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-203ENST00000419004 778 ntTSL 514.03□□□□□ -0.162e-17■■□□□ 13.3
CSTF2TQ9H0L4 OVOL2-204ENST00000486776 550 ntTSL 313.28□□□□□ -0.282e-17■■□□□ 13.3
CSTF2TQ9H0L4 SNX5-207ENST00000474883 695 ntTSL 56.07□□□□□ -1.442e-17■■□□□ 13.3
CSTF2TQ9H0L4 SLC7A1-202ENST00000450494 547 ntTSL 216.21■□□□□ 0.192e-6■■□□□ 13.3
CSTF2TQ9H0L4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.392e-6■■□□□ 13.3
CSTF2TQ9H0L4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.282e-6■■□□□ 13.3
CSTF2TQ9H0L4 KSR1-217ENST00000583370 1041 ntTSL 316.21■□□□□ 0.192e-6■■□□□ 13.3
CSTF2TQ9H0L4 KSR1-215ENST00000582311 693 ntTSL 213.37□□□□□ -0.272e-6■■□□□ 13.3
CSTF2TQ9H0L4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.342e-6■■□□□ 13.3
CSTF2TQ9H0L4 LAMA5-209ENST00000481120 386 ntTSL 221.41■■□□□ 1.025e-12■■□□□ 13.3
CSTF2TQ9H0L4 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.9■□□□□ 0.462e-6■■□□□ 13.3
CSTF2TQ9H0L4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■□□□ 13.3
CSTF2TQ9H0L4 DUT-206ENST00000558978 1171 ntTSL 317.24■□□□□ 0.352e-6■■□□□ 13.3
CSTF2TQ9H0L4 DUT-204ENST00000558472 724 ntTSL 316.8■□□□□ 0.282e-6■■□□□ 13.3
CSTF2TQ9H0L4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.37■□□□□ 0.052e-6■■□□□ 13.3
CSTF2TQ9H0L4 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.28□□□□□ -0.442e-6■■□□□ 13.3
CSTF2TQ9H0L4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31e-6■■□□□ 13.3
CSTF2TQ9H0L4 HNRNPL-208ENST00000600233 659 ntTSL 513.58□□□□□ -0.243e-6■■□□□ 13.3
CSTF2TQ9H0L4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.165e-7■■□□□ 13.2
CSTF2TQ9H0L4 SLC25A28-204ENST00000496035 744 ntTSL 37.74□□□□□ -1.175e-7■■□□□ 13.2
CSTF2TQ9H0L4 FAM60A-208ENST00000543615 669 ntTSL 517■□□□□ 0.312e-10■■□□□ 13.2
CSTF2TQ9H0L4 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.93e-6■■□□□ 13.2
CSTF2TQ9H0L4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.031e-7■■□□□ 13.2
CSTF2TQ9H0L4 ZNF692-217ENST00000495731 461 ntTSL 325.71■■□□□ 1.719e-20■■□□□ 13.2
Retrieved 100 of 19,151 protein–RNA pairs in 102.1 ms