RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
CSNK2A1-209ENST00000609606 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
CSNK2A1-209ENST00000609606 ABCC9O60706 1549 aa31.06■■■□□ 2.56
CSNK2A1-209ENST00000609606 ZCCHC6Q5VYS8 1495 aaKnown RBP30.14■■■□□ 2.42
CSNK2A1-209ENST00000609606 NACADO15069 1562 aa30.09■■■□□ 2.41
CSNK2A1-209ENST00000609606 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
CSNK2A1-209ENST00000609606 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
CSNK2A1-209ENST00000609606 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
CSNK2A1-209ENST00000609606 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
CSNK2A1-209ENST00000609606 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
CSNK2A1-209ENST00000609606 SCRIBQ14160 1630 aa29.2■■■□□ 2.26
CSNK2A1-209ENST00000609606 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
CSNK2A1-209ENST00000609606 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
CSNK2A1-209ENST00000609606 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
CSNK2A1-209ENST00000609606 AEBP2Q6ZN18 517 aaPredicted RBP28.68■■■□□ 2.18
CSNK2A1-209ENST00000609606 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
CSNK2A1-209ENST00000609606 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
CSNK2A1-209ENST00000609606 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
CSNK2A1-209ENST00000609606 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
CSNK2A1-209ENST00000609606 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
CSNK2A1-209ENST00000609606 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
CSNK2A1-209ENST00000609606 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
CSNK2A1-209ENST00000609606 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
CSNK2A1-209ENST00000609606 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
CSNK2A1-209ENST00000609606 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
CSNK2A1-209ENST00000609606 PEG3Q9GZU2 1588 aa27.75■■■□□ 2.03
CSNK2A1-209ENST00000609606 NCAPD3P42695 1498 aa27.75■■■□□ 2.03
CSNK2A1-209ENST00000609606 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
CSNK2A1-209ENST00000609606 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
CSNK2A1-209ENST00000609606 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
CSNK2A1-209ENST00000609606 WIZO95785 1651 aa27.53■■■□□ 2
CSNK2A1-209ENST00000609606 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
CSNK2A1-209ENST00000609606 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
CSNK2A1-209ENST00000609606 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
CSNK2A1-209ENST00000609606 NESP48681 1621 aa26.94■■□□□ 1.9
CSNK2A1-209ENST00000609606 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
CSNK2A1-209ENST00000609606 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
CSNK2A1-209ENST00000609606 CFTRP13569 1480 aa26.82■■□□□ 1.88
CSNK2A1-209ENST00000609606 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
CSNK2A1-209ENST00000609606 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
CSNK2A1-209ENST00000609606 PRDM2Q13029 1718 aa26.7■■□□□ 1.87
CSNK2A1-209ENST00000609606 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
CSNK2A1-209ENST00000609606 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
CSNK2A1-209ENST00000609606 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
CSNK2A1-209ENST00000609606 THOC2Q8NI27 1593 aaKnown RBP26.55■■□□□ 1.84
CSNK2A1-209ENST00000609606 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
CSNK2A1-209ENST00000609606 CUX2O14529 1486 aa26.47■■□□□ 1.83
CSNK2A1-209ENST00000609606 WDR62O43379 1518 aa26.4■■□□□ 1.82
CSNK2A1-209ENST00000609606 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.81
CSNK2A1-209ENST00000609606 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
CSNK2A1-209ENST00000609606 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
CSNK2A1-209ENST00000609606 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
CSNK2A1-209ENST00000609606 CUX1P39880 1505 aa26.09■■□□□ 1.77
CSNK2A1-209ENST00000609606 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
CSNK2A1-209ENST00000609606 IFT140Q96RY7 1462 aa26■■□□□ 1.75
CSNK2A1-209ENST00000609606 WRNQ14191 1432 aaPredicted RBP eCLIP26■■□□□ 1.75
CSNK2A1-209ENST00000609606 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
CSNK2A1-209ENST00000609606 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
CSNK2A1-209ENST00000609606 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
CSNK2A1-209ENST00000609606 TARBP1Q13395 1621 aaKnown RBP25.93■■□□□ 1.74
CSNK2A1-209ENST00000609606 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
CSNK2A1-209ENST00000609606 SOGA1O94964 1423 aa25.88■■□□□ 1.73
CSNK2A1-209ENST00000609606 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
CSNK2A1-209ENST00000609606 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
CSNK2A1-209ENST00000609606 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
CSNK2A1-209ENST00000609606 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
CSNK2A1-209ENST00000609606 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
CSNK2A1-209ENST00000609606 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.711e-7■■■■□ 23.8
CSNK2A1-209ENST00000609606 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
CSNK2A1-209ENST00000609606 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
CSNK2A1-209ENST00000609606 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
CSNK2A1-209ENST00000609606 GRIN2BQ13224 1484 aa25.58■■□□□ 1.69
CSNK2A1-209ENST00000609606 PBRM1Q86U86 1689 aa25.56■■□□□ 1.68
CSNK2A1-209ENST00000609606 MAGI1Q96QZ7 1491 aaPredicted RBP25.51■■□□□ 1.67
CSNK2A1-209ENST00000609606 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
CSNK2A1-209ENST00000609606 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
CSNK2A1-209ENST00000609606 ERICH3Q5RHP9 1530 aa25.46■■□□□ 1.67
CSNK2A1-209ENST00000609606 KIF27Q86VH2 1401 aa25.45■■□□□ 1.66
CSNK2A1-209ENST00000609606 CHD1O14646 1710 aa25.42■■□□□ 1.66
CSNK2A1-209ENST00000609606 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
CSNK2A1-209ENST00000609606 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
CSNK2A1-209ENST00000609606 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
CSNK2A1-209ENST00000609606 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
CSNK2A1-209ENST00000609606 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
CSNK2A1-209ENST00000609606 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
CSNK2A1-209ENST00000609606 IGF1RP08069 1367 aa25.31■■□□□ 1.64
CSNK2A1-209ENST00000609606 FBLN2P98095 1184 aa25.31■■□□□ 1.64
CSNK2A1-209ENST00000609606 CUL7Q14999 1698 aa25.28■■□□□ 1.64
CSNK2A1-209ENST00000609606 GRIN2AQ12879 1464 aa25.25■■□□□ 1.63
CSNK2A1-209ENST00000609606 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
CSNK2A1-209ENST00000609606 CARMIL1Q5VZK9 1371 aa25.16■■□□□ 1.62
CSNK2A1-209ENST00000609606 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
CSNK2A1-209ENST00000609606 NUP160Q12769 1436 aa25.14■■□□□ 1.62
CSNK2A1-209ENST00000609606 EEA1Q15075 1411 aa25.14■■□□□ 1.62
CSNK2A1-209ENST00000609606 CEP170Q5SW79 1584 aa25.11■■□□□ 1.61
CSNK2A1-209ENST00000609606 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
CSNK2A1-209ENST00000609606 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
CSNK2A1-209ENST00000609606 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
CSNK2A1-209ENST00000609606 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
CSNK2A1-209ENST00000609606 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms