Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AC006970.2-201ENST00000450065 779 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AC098934.4-201ENST00000564127 592 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AL031985.4-201ENST00000642138 673 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 KRT16P1-201ENST00000399124 1418 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 AC092068.3-201ENST00000587894 2016 ntBASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 AL162430.1-201ENST00000480705 870 ntBASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 AL513523.2-202ENST00000427283 2040 ntBASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 AC007950.2-201ENST00000615045 2347 ntBASIC15.14■□□□□ 0.01
SMIM4Q8WVI0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 AC046185.3-201ENST00000623228 1824 ntBASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 LYSMD4-203ENST00000378904 2122 ntBASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 UNC93B5-201ENST00000530315 699 ntBASIC15.13■□□□□ 0.01
SMIM4Q8WVI0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms