Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
SRFBP1Q8NEF9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 AC009533.2-201ENST00000543664 586 ntBASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
SRFBP1Q8NEF9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.89■□□□□ 0.3
SRFBP1Q8NEF9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 AC125634.1-201ENST00000438758 1403 ntBASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 COX5BP2-201ENST00000392354 334 ntBASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 AP002414.4-201ENST00000589764 1148 ntBASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 AL138831.2-201ENST00000606564 490 ntBASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRFBP1Q8NEF9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 ATP5G2P1-201ENST00000433580 426 ntBASIC16.88■□□□□ 0.29
SRFBP1Q8NEF9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms