Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE9Q8IYJ1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE9Q8IYJ1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CPNE9Q8IYJ1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 OR6D1P-202ENST00000641007 5290 ntBASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 DDX43P3-201ENST00000441064 443 ntBASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 AL136038.3-201ENST00000561909 1096 ntBASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE9Q8IYJ1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 LINC00304-203ENST00000565008 1864 ntBASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 TSPY22P-201ENST00000427496 604 ntBASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE9Q8IYJ1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 AC133963.1-201ENST00000504166 1679 ntBASIC17.52■□□□□ 0.39
CPNE9Q8IYJ1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE9Q8IYJ1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms