Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
KCNIP4Q6PIL6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AC010980.2-201ENST00000587099 1412 ntBASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AL390719.1-204ENST00000412397 1219 ntBASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
KCNIP4Q6PIL6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 AC097376.2-205ENST00000610159 5334 ntBASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 MIR663A-201ENST00000385250 93 ntBASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 AC073111.5-205ENST00000641717 521 ntBASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
KCNIP4Q6PIL6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 OR2I1P-209ENST00000641730 5365 ntBASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KCNIP4Q6PIL6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms