Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LDB2O43679 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LDB2O43679 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LDB2O43679 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.69■□□□□ 0.42
LDB2O43679 TOB2P1-201ENST00000469761 992 ntBASIC17.69■□□□□ 0.42
LDB2O43679 VENTXP7-201ENST00000475503 772 ntBASIC17.69■□□□□ 0.42
LDB2O43679 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LDB2O43679 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LDB2O43679 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.69■□□□□ 0.42
LDB2O43679 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.69■□□□□ 0.42
LDB2O43679 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LDB2O43679 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LDB2O43679 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 SIRPAP1-201ENST00000448467 1770 ntBASIC17.68■□□□□ 0.42
LDB2O43679 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LDB2O43679 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 ATP5G2P1-201ENST00000433580 426 ntBASIC17.68■□□□□ 0.42
LDB2O43679 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.68■□□□□ 0.42
LDB2O43679 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.68■□□□□ 0.42
LDB2O43679 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.68■□□□□ 0.42
LDB2O43679 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LDB2O43679 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LDB2O43679 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LDB2O43679 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LDB2O43679 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
LDB2O43679 IGHV3-47-201ENST00000425060 335 ntBASIC17.67■□□□□ 0.42
LDB2O43679 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 AC122714.2-201ENST00000502787 707 ntBASIC17.67■□□□□ 0.42
LDB2O43679 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.67■□□□□ 0.42
LDB2O43679 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LDB2O43679 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 Z69720.1-201ENST00000601483 472 ntBASIC17.67■□□□□ 0.42
LDB2O43679 AC019129.2-201ENST00000609837 1235 ntBASIC17.67■□□□□ 0.42
LDB2O43679 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.67■□□□□ 0.42
LDB2O43679 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.67■□□□□ 0.42
LDB2O43679 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.67■□□□□ 0.42
LDB2O43679 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LDB2O43679 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LDB2O43679 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.67■□□□□ 0.42
LDB2O43679 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LDB2O43679 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
LDB2O43679 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB2O43679 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LDB2O43679 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
LDB2O43679 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms