Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.68■■□□□ 1.22
CHL1O00533 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CHL1O00533 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.68■■□□□ 1.22
CHL1O00533 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.68■■□□□ 1.22
CHL1O00533 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.68■■□□□ 1.22
CHL1O00533 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHL1O00533 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CHL1O00533 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHL1O00533 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHL1O00533 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.67■■□□□ 1.22
CHL1O00533 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 IL9RP2-201ENST00000423948 1312 ntBASIC22.67■■□□□ 1.22
CHL1O00533 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.67■■□□□ 1.22
CHL1O00533 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.67■■□□□ 1.22
CHL1O00533 LAGE3P1-201ENST00000425356 484 ntBASIC22.67■■□□□ 1.22
CHL1O00533 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.67■■□□□ 1.22
CHL1O00533 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.67■■□□□ 1.22
CHL1O00533 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.67■■□□□ 1.22
CHL1O00533 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 HLA-J-201ENST00000462773 1622 ntBASIC22.67■■□□□ 1.22
CHL1O00533 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
CHL1O00533 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHL1O00533 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 NOC2LP2-201ENST00000407594 1944 ntBASIC22.67■■□□□ 1.22
CHL1O00533 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHL1O00533 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.66■■□□□ 1.22
CHL1O00533 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CHL1O00533 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.66■■□□□ 1.22
CHL1O00533 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.66■■□□□ 1.22
CHL1O00533 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 RPS2P28-201ENST00000314255 741 ntBASIC22.66■■□□□ 1.22
CHL1O00533 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 AL590627.1-203ENST00000421194 1026 ntBASIC22.66■■□□□ 1.22
CHL1O00533 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.66■■□□□ 1.22
CHL1O00533 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.66■■□□□ 1.22
CHL1O00533 AL139327.4-201ENST00000612362 153 ntBASIC22.66■■□□□ 1.22
CHL1O00533 AL589182.2-201ENST00000619332 1049 ntBASIC22.66■■□□□ 1.22
CHL1O00533 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.66■■□□□ 1.22
CHL1O00533 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.66■■□□□ 1.22
CHL1O00533 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.66■■□□□ 1.22
CHL1O00533 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHL1O00533 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.65■■□□□ 1.22
CHL1O00533 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CHL1O00533 AC073621.1-201ENST00000392730 636 ntBASIC22.65■■□□□ 1.22
CHL1O00533 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 IGHV3-22-201ENST00000520721 359 ntBASIC22.65■■□□□ 1.22
CHL1O00533 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.65■■□□□ 1.22
CHL1O00533 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CHL1O00533 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.65■■□□□ 1.22
CHL1O00533 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.65■■□□□ 1.22
CHL1O00533 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.65■■□□□ 1.22
CHL1O00533 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.65■■□□□ 1.22
CHL1O00533 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHL1O00533 AC133963.1-201ENST00000504166 1679 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms