Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 CYP2T1P-202ENST00000641596 2535 ntBASIC16.91■□□□□ 0.3
VCX3BQ9H321 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AL512625.2-201ENST00000417533 625 ntBASIC16.91■□□□□ 0.3
VCX3BQ9H321 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
VCX3BQ9H321 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VCX3BQ9H321 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
VCX3BQ9H321 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 KRT18P61-201ENST00000585825 1298 ntBASIC16.9■□□□□ 0.3
VCX3BQ9H321 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
VCX3BQ9H321 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VCX3BQ9H321 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.89■□□□□ 0.3
VCX3BQ9H321 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.89■□□□□ 0.3
VCX3BQ9H321 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
VCX3BQ9H321 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 AC060834.1-201ENST00000443027 2032 ntBASIC16.89■□□□□ 0.29
VCX3BQ9H321 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 AC110285.6-201ENST00000617652 491 ntBASIC16.89■□□□□ 0.29
VCX3BQ9H321 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
VCX3BQ9H321 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VCX3BQ9H321 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 AL109659.2-201ENST00000606809 1674 ntBASIC16.88■□□□□ 0.29
VCX3BQ9H321 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VCX3BQ9H321 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.88■□□□□ 0.29
VCX3BQ9H321 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms