Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 FAM220CP-201ENST00000395253 831 ntBASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 TP73-AS1-207ENST00000624167 988 ntBASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC099398.1-201ENST00000567919 2776 ntBASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRICKLE1Q96MT3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRICKLE1Q96MT3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 AC009078.2-202ENST00000463353 338 ntBASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 AL121912.1-201ENST00000603683 238 ntBASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.28■□□□□ 0.52
PRICKLE1Q96MT3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms