Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 AL121845.3-203ENST00000496820 507 ntTSL 521.02■□□□□ 0.963e-9■□□□□ 10.2
LARP4Q71RC2 PTP4A1-203ENST00000473334 638 ntTSL 320.59■□□□□ 0.891e-6■□□□□ 10.2
LARP4Q71RC2 ATP2A2-203ENST00000377685 5702 ntTSL 520.57■□□□□ 0.881e-6■□□□□ 10.2
LARP4Q71RC2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.44■□□□□ 0.862e-8■□□□□ 10.2
LARP4Q71RC2 HES6-207ENST00000417803 474 ntTSL 320.43■□□□□ 0.862e-8■□□□□ 10.2
LARP4Q71RC2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.791e-6■□□□□ 10.2
LARP4Q71RC2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.792e-8■□□□□ 10.2
LARP4Q71RC2 LIME1-207ENST00000489212 559 ntTSL 519.33■□□□□ 0.683e-9■□□□□ 10.2
LARP4Q71RC2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.651e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.63■□□□□ 0.571e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.55■□□□□ 0.561e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-208ENST00000441840 1854 ntTSL 518.53■□□□□ 0.561e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-206ENST00000549857 2343 ntTSL 218.39■□□□□ 0.531e-6■□□□□ 10.2
LARP4Q71RC2 CNP-205ENST00000486438 911 ntTSL 218.24■□□□□ 0.512e-8■□□□□ 10.2
LARP4Q71RC2 NEU4-216ENST00000494678 491 ntTSL 417.86■□□□□ 0.451e-6■□□□□ 10.2
LARP4Q71RC2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.41e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-211ENST00000449997 2169 ntTSL 217.48■□□□□ 0.391e-6■□□□□ 10.2
LARP4Q71RC2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.361e-6■□□□□ 10.2
LARP4Q71RC2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.326e-16■□□□□ 10.2
LARP4Q71RC2 LMNB2-205ENST00000532465 769 ntTSL 317.05■□□□□ 0.321e-6■□□□□ 10.2
LARP4Q71RC2 CNP-210ENST00000592105 572 ntTSL 416.83■□□□□ 0.282e-8■□□□□ 10.2
LARP4Q71RC2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.281e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.73■□□□□ 0.271e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-201ENST00000411855 1447 ntTSL 216.7■□□□□ 0.261e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-203ENST00000429716 1622 ntTSL 216.49■□□□□ 0.231e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.45■□□□□ 0.221e-6■□□□□ 10.2
LARP4Q71RC2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.221e-6■□□□□ 10.2
LARP4Q71RC2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.21e-6■□□□□ 10.2
LARP4Q71RC2 LMNB2-202ENST00000475819 885 ntTSL 516.02■□□□□ 0.161e-6■□□□□ 10.2
LARP4Q71RC2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-6■□□□□ 10.2
LARP4Q71RC2 CARM1-203ENST00000586221 2766 ntTSL 1 (best)15.82■□□□□ 0.121e-6■□□□□ 10.2
LARP4Q71RC2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.081e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.47■□□□□ 0.071e-6■□□□□ 10.2
LARP4Q71RC2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.031e-6■□□□□ 10.2
LARP4Q71RC2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.041e-6■□□□□ 10.2
LARP4Q71RC2 RPTOR-209ENST00000575542 5536 ntTSL 1 (best)14.77□□□□□ -0.051e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-205ENST00000547747 430 ntTSL 314.75□□□□□ -0.051e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-204ENST00000547709 626 ntTSL 314.55□□□□□ -0.081e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.55□□□□□ -0.081e-6■□□□□ 10.2
LARP4Q71RC2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.34□□□□□ -0.111e-6■□□□□ 10.2
LARP4Q71RC2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.131e-6■□□□□ 10.2
LARP4Q71RC2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.131e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.85□□□□□ -0.191e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.53□□□□□ -0.241e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-215ENST00000575283 2213 ntTSL 213.23□□□□□ -0.291e-6■□□□□ 10.2
LARP4Q71RC2 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.312e-8■□□□□ 10.2
LARP4Q71RC2 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.351e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-221ENST00000497184 4090 ntTSL 1 (best)12.8□□□□□ -0.361e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-212ENST00000452661 897 ntTSL 212.45□□□□□ -0.421e-6■□□□□ 10.2
LARP4Q71RC2 OSGEP-210ENST00000556124 1546 ntTSL 511.81□□□□□ -0.521e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-202ENST00000303665 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.561e-6■□□□□ 10.2
LARP4Q71RC2 DBNL-204ENST00000432854 9618 ntTSL 511.03□□□□□ -0.641e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-204ENST00000578519 894 ntTSL 310.95□□□□□ -0.661e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-201ENST00000289968 3461 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.661e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-209ENST00000571843 1292 ntTSL 1 (best)10.69□□□□□ -0.71e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-206ENST00000581068 595 ntTSL 2 BASIC10.66□□□□□ -0.71e-6■□□□□ 10.2
LARP4Q71RC2 C17orf49-207ENST00000550038 363 ntTSL 310.55□□□□□ -0.721e-6■□□□□ 10.2
LARP4Q71RC2 TIMM17A-201ENST00000367287 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.741e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-213ENST00000573703 1616 nt10.33□□□□□ -0.761e-6■□□□□ 10.2
LARP4Q71RC2 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.81e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-206ENST00000571406 1135 ntTSL 39.93□□□□□ -0.821e-6■□□□□ 10.2
LARP4Q71RC2 DPH3-203ENST00000462982 738 ntTSL 29.9□□□□□ -0.821e-6■□□□□ 10.2
LARP4Q71RC2 PRPF38A-202ENST00000474048 1059 ntTSL 1 (best)9.84□□□□□ -0.831e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-207ENST00000583380 583 ntTSL 5 BASIC9.23□□□□□ -0.931e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-208ENST00000583927 533 ntTSL 29.03□□□□□ -0.961e-6■□□□□ 10.2
LARP4Q71RC2 OSGEP-202ENST00000553292 530 ntTSL 28.85□□□□□ -0.991e-6■□□□□ 10.2
LARP4Q71RC2 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -11e-6■□□□□ 10.2
LARP4Q71RC2 OSGEP-204ENST00000554249 987 ntTSL 28.8□□□□□ -11e-6■□□□□ 10.2
LARP4Q71RC2 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC8.61□□□□□ -1.031e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.071e-6■□□□□ 10.2
LARP4Q71RC2 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.22□□□□□ -1.091e-6■□□□□ 10.2
LARP4Q71RC2 DPH3-201ENST00000285082 1178 ntTSL 1 (best)8.18□□□□□ -1.11e-6■□□□□ 10.2
LARP4Q71RC2 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)8.09□□□□□ -1.111e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-214ENST00000573765 1467 ntTSL 27.86□□□□□ -1.151e-6■□□□□ 10.2
LARP4Q71RC2 PTP4A1-202ENST00000470661 479 ntTSL 27.46□□□□□ -1.221e-6■□□□□ 10.2
LARP4Q71RC2 OSGEP-208ENST00000555656 3258 ntTSL 27.41□□□□□ -1.221e-6■□□□□ 10.2
LARP4Q71RC2 TIMM17A-203ENST00000482943 2523 ntTSL 26.6□□□□□ -1.351e-6■□□□□ 10.2
LARP4Q71RC2 ARHGAP17-204ENST00000570320 2847 ntTSL 26.3□□□□□ -1.41e-6■□□□□ 10.2
LARP4Q71RC2 TIMM17A-202ENST00000478378 821 ntTSL 35.99□□□□□ -1.451e-6■□□□□ 10.2
LARP4Q71RC2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.39□□□□□ -1.551e-6■□□□□ 10.2
LARP4Q71RC2 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)3.9□□□□□ -1.791e-6■□□□□ 10.2
LARP4Q71RC2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.02□□□□□ -1.931e-6■□□□□ 10.2
LARP4Q71RC2 ATP11A-206ENST00000419631 2446 ntTSL 313□□□□□ -0.331e-16■□□□□ 10.2
LARP4Q71RC2 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.51e-16■□□□□ 10.2
LARP4Q71RC2 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.551e-16■□□□□ 10.2
LARP4Q71RC2 ATP11A-210ENST00000471555 5786 ntTSL 1 (best)10.76□□□□□ -0.691e-16■□□□□ 10.2
LARP4Q71RC2 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.811e-16■□□□□ 10.2
LARP4Q71RC2 ATP11A-217ENST00000614170 3542 nt9.77□□□□□ -0.851e-16■□□□□ 10.2
LARP4Q71RC2 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC10.9□□□□□ -0.663e-30■□□□□ 10.2
LARP4Q71RC2 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.073e-30■□□□□ 10.2
LARP4Q71RC2 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.19□□□□□ -1.263e-30■□□□□ 10.2
LARP4Q71RC2 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.01□□□□□ -1.293e-30■□□□□ 10.2
LARP4Q71RC2 CYB5B-206ENST00000568237 577 ntTSL 55.67□□□□□ -1.53e-30■□□□□ 10.2
LARP4Q71RC2 FGFR4-216ENST00000514472 552 ntTSL 420.19■□□□□ 0.823e-11■□□□□ 10.2
LARP4Q71RC2 FGFR4-212ENST00000510911 709 ntTSL 419.25■□□□□ 0.673e-11■□□□□ 10.2
LARP4Q71RC2 FGFR4-209ENST00000507708 476 ntTSL 319.1■□□□□ 0.653e-11■□□□□ 10.2
LARP4Q71RC2 FGFR4-208ENST00000503708 770 ntTSL 416.98■□□□□ 0.313e-11■□□□□ 10.2
LARP4Q71RC2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.87■□□□□ 0.299e-7■□□□□ 10.2
LARP4Q71RC2 B2M-202ENST00000544417 933 ntTSL 5 BASIC10.05□□□□□ -0.89e-10■□□□□ 10.2
Retrieved 100 of 15,922 protein–RNA pairs in 378.7 ms