RNA–Protein interactions for RNA: ENST00000549857.1

C17orf49-206, Transcript of chromosome 17 open reading frame 49, humanhuman

TSL 2

Gene C17orf49, Length 2,343 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf49-206ENST00000549857 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
C17orf49-206ENST00000549857 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
C17orf49-206ENST00000549857 ABCC9O60706 1549 aa32.04■■■□□ 2.72
C17orf49-206ENST00000549857 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
C17orf49-206ENST00000549857 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
C17orf49-206ENST00000549857 DCAF8L2P0C7V8 631 aa31.49■■■□□ 2.63
C17orf49-206ENST00000549857 SUPT5HO00267 1087 aaKnown RBP31.46■■■□□ 2.63
C17orf49-206ENST00000549857 DCAF1Q9Y4B6 1507 aa31.42■■■□□ 2.62
C17orf49-206ENST00000549857 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
C17orf49-206ENST00000549857 NACADO15069 1562 aa31.24■■■□□ 2.59
C17orf49-206ENST00000549857 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
C17orf49-206ENST00000549857 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
C17orf49-206ENST00000549857 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
C17orf49-206ENST00000549857 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
C17orf49-206ENST00000549857 HRCP23327 699 aa30.44■■■□□ 2.46
C17orf49-206ENST00000549857 PCGF6Q9BYE7 350 aa30.22■■■□□ 2.43
C17orf49-206ENST00000549857 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
C17orf49-206ENST00000549857 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
C17orf49-206ENST00000549857 LOC105371045A0A1W2PR82 267 aa29.9■■■□□ 2.38
C17orf49-206ENST00000549857 PPARGC1BQ86YN6 1023 aaKnown RBP29.83■■■□□ 2.37
C17orf49-206ENST00000549857 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
C17orf49-206ENST00000549857 TRIM26Q12899 539 aaPredicted RBP29.49■■■□□ 2.31
C17orf49-206ENST00000549857 RSF1Q96T23 1441 aaPredicted RBP29.4■■■□□ 2.3
C17orf49-206ENST00000549857 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
C17orf49-206ENST00000549857 EIF4G1Q04637 1599 aaKnown RBP29.31■■■□□ 2.28
C17orf49-206ENST00000549857 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
C17orf49-206ENST00000549857 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
C17orf49-206ENST00000549857 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
C17orf49-206ENST00000549857 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
C17orf49-206ENST00000549857 WIZO95785 1651 aa29.02■■■□□ 2.24
C17orf49-206ENST00000549857 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
C17orf49-206ENST00000549857 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
C17orf49-206ENST00000549857 ZEB1P37275 1124 aaPredicted RBP28.98■■■□□ 2.23
C17orf49-206ENST00000549857 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
C17orf49-206ENST00000549857 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
C17orf49-206ENST00000549857 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
C17orf49-206ENST00000549857 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
C17orf49-206ENST00000549857 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
C17orf49-206ENST00000549857 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
C17orf49-206ENST00000549857 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
C17orf49-206ENST00000549857 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
C17orf49-206ENST00000549857 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
C17orf49-206ENST00000549857 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
C17orf49-206ENST00000549857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.3■■■□□ 2.12
C17orf49-206ENST00000549857 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
C17orf49-206ENST00000549857 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
C17orf49-206ENST00000549857 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
C17orf49-206ENST00000549857 TTBK1Q5TCY1 1321 aaPredicted RBP28.05■■■□□ 2.08
C17orf49-206ENST00000549857 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
C17orf49-206ENST00000549857 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.08
C17orf49-206ENST00000549857 CFTRP13569 1480 aa28.03■■■□□ 2.08
C17orf49-206ENST00000549857 CEP162Q5TB80 1403 aa28.02■■■□□ 2.08
C17orf49-206ENST00000549857 SOGA1O94964 1423 aa27.99■■■□□ 2.07
C17orf49-206ENST00000549857 NESP48681 1621 aa27.96■■■□□ 2.07
C17orf49-206ENST00000549857 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.06
C17orf49-206ENST00000549857 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
C17orf49-206ENST00000549857 ACIN1Q9UKV3 1341 aaKnown RBP27.9■■■□□ 2.06
C17orf49-206ENST00000549857 DIEXFQ68CQ4 756 aaKnown RBP27.88■■■□□ 2.05
C17orf49-206ENST00000549857 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
C17orf49-206ENST00000549857 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
C17orf49-206ENST00000549857 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
C17orf49-206ENST00000549857 CSRNP3Q8WYN3 585 aa27.83■■■□□ 2.05
C17orf49-206ENST00000549857 UBTFP17480 764 aaKnown RBP27.81■■■□□ 2.04
C17orf49-206ENST00000549857 EEA1Q15075 1411 aa27.8■■■□□ 2.04
C17orf49-206ENST00000549857 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
C17orf49-206ENST00000549857 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
C17orf49-206ENST00000549857 GOLGA3Q08378 1498 aa27.69■■■□□ 2.02
C17orf49-206ENST00000549857 CENPBP07199 599 aaPredicted RBP27.66■■■□□ 2.02
C17orf49-206ENST00000549857 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.02
C17orf49-206ENST00000549857 GTF3C3Q9Y5Q9 886 aa27.62■■■□□ 2.01
C17orf49-206ENST00000549857 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
C17orf49-206ENST00000549857 ZNF316A6NFI3 1004 aaPredicted RBP27.56■■■□□ 2
C17orf49-206ENST00000549857 ERCC6Q03468 1493 aa27.54■■■□□ 2
C17orf49-206ENST00000549857 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
C17orf49-206ENST00000549857 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.99
C17orf49-206ENST00000549857 KIF21BO75037 1637 aa27.45■■□□□ 1.99
C17orf49-206ENST00000549857 CUX1P39880 1505 aa27.43■■□□□ 1.98
C17orf49-206ENST00000549857 CLIP1P30622 1438 aa27.41■■□□□ 1.98
C17orf49-206ENST00000549857 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
C17orf49-206ENST00000549857 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
C17orf49-206ENST00000549857 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
C17orf49-206ENST00000549857 DNMBPQ6XZF7 1577 aa27.37■■□□□ 1.97
C17orf49-206ENST00000549857 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
C17orf49-206ENST00000549857 TOPBP1Q92547 1522 aa27.36■■□□□ 1.97
C17orf49-206ENST00000549857 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
C17orf49-206ENST00000549857 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
C17orf49-206ENST00000549857 YTHDC1Q96MU7 727 aaKnown RBP27.3■■□□□ 1.96
C17orf49-206ENST00000549857 WDR62O43379 1518 aa27.3■■□□□ 1.96
C17orf49-206ENST00000549857 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
C17orf49-206ENST00000549857 MIER1Q8N108 512 aa27.25■■□□□ 1.95
C17orf49-206ENST00000549857 APLP2Q06481 763 aa27.24■■□□□ 1.95
C17orf49-206ENST00000549857 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
C17orf49-206ENST00000549857 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
C17orf49-206ENST00000549857 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
C17orf49-206ENST00000549857 CUX2O14529 1486 aa27.08■■□□□ 1.93
C17orf49-206ENST00000549857 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
C17orf49-206ENST00000549857 TARBP1Q13395 1621 aaKnown RBP27.01■■□□□ 1.91
C17orf49-206ENST00000549857 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
C17orf49-206ENST00000549857 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
C17orf49-206ENST00000549857 WDR97A6NE52 1622 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms