Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 DDX43P3-201ENST00000441064 443 ntBASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 STK19B-204ENST00000512515 211 ntBASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 AC010654.1-201ENST00000615722 808 ntBASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 BX276092.7-203ENST00000637198 1536 ntBASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 AC009336.1-201ENST00000608941 1553 ntBASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 LINC02084-201ENST00000606069 1096 ntBASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 AC010507.1-201ENST00000633895 436 ntBASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
TRIM71Q2Q1W2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 MRPL20P1-201ENST00000400819 433 ntBASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 AC097637.2-201ENST00000624096 1997 ntBASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM71Q2Q1W2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 ELL2P1-201ENST00000413990 1906 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AP002414.1-201ENST00000391405 1147 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 LINC00982-205ENST00000420957 435 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 RHOQP3-201ENST00000437982 621 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AC096734.2-201ENST00000562054 433 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 PDPK2P-202ENST00000562415 1191 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 SNHG9-202ENST00000564014 471 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 AC004877.2-201ENST00000623941 599 ntBASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM71Q2Q1W2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM71Q2Q1W2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms