Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 TSPY13P-201ENST00000338964 914 ntBASIC13.35□□□□□ -0.27
HIST1H2BDP58876 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 AP001160.3-201ENST00000601484 763 ntBASIC13.35□□□□□ -0.27
HIST1H2BDP58876 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.35□□□□□ -0.27
HIST1H2BDP58876 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HIST1H2BDP58876 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 AC013268.4-201ENST00000637413 2228 ntBASIC13.34□□□□□ -0.27
HIST1H2BDP58876 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 AL356740.2-201ENST00000601559 647 ntBASIC13.34□□□□□ -0.27
HIST1H2BDP58876 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.34□□□□□ -0.27
HIST1H2BDP58876 AC233992.3-201ENST00000607491 485 ntBASIC13.34□□□□□ -0.27
HIST1H2BDP58876 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST1H2BDP58876 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 AC026748.1-201ENST00000624349 3251 ntBASIC13.33□□□□□ -0.27
HIST1H2BDP58876 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HIST1H2BDP58876 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HIST1H2BDP58876 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BDP58876 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BDP58876 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST1H2BDP58876 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST1H2BDP58876 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms