Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 KLF4P1-201ENST00000412782 1185 ntBASIC18.34■□□□□ 0.53
GJA1P17302 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.34■□□□□ 0.53
GJA1P17302 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.34■□□□□ 0.53
GJA1P17302 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.34■□□□□ 0.53
GJA1P17302 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.34■□□□□ 0.53
GJA1P17302 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.34■□□□□ 0.53
GJA1P17302 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.34■□□□□ 0.53
GJA1P17302 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.34■□□□□ 0.53
GJA1P17302 AL589182.2-201ENST00000619332 1049 ntBASIC18.34■□□□□ 0.53
GJA1P17302 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.34■□□□□ 0.53
GJA1P17302 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GJA1P17302 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GJA1P17302 AL020996.1-203ENST00000536896 2307 ntBASIC18.34■□□□□ 0.53
GJA1P17302 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
GJA1P17302 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.34■□□□□ 0.53
GJA1P17302 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GJA1P17302 TNXA-203ENST00000507684 2038 ntBASIC18.33■□□□□ 0.53
GJA1P17302 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.33■□□□□ 0.53
GJA1P17302 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.33■□□□□ 0.53
GJA1P17302 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GJA1P17302 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GJA1P17302 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.33■□□□□ 0.53
GJA1P17302 AC104581.1-202ENST00000635932 2618 ntBASIC18.33■□□□□ 0.53
GJA1P17302 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.33■□□□□ 0.52
GJA1P17302 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.33■□□□□ 0.52
GJA1P17302 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.33■□□□□ 0.52
GJA1P17302 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.33■□□□□ 0.52
GJA1P17302 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.33■□□□□ 0.52
GJA1P17302 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 AC004408.2-201ENST00000623613 2777 ntBASIC18.33■□□□□ 0.52
GJA1P17302 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
GJA1P17302 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.33■□□□□ 0.52
GJA1P17302 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GJA1P17302 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GJA1P17302 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
GJA1P17302 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.32■□□□□ 0.52
GJA1P17302 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
GJA1P17302 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
GJA1P17302 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.32■□□□□ 0.52
GJA1P17302 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.32■□□□□ 0.52
GJA1P17302 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.32■□□□□ 0.52
GJA1P17302 PGM5P2-202ENST00000637225 1043 ntBASIC18.32■□□□□ 0.52
GJA1P17302 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GJA1P17302 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.32■□□□□ 0.52
GJA1P17302 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GJA1P17302 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
GJA1P17302 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GJA1P17302 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GJA1P17302 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GJA1P17302 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GJA1P17302 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.31■□□□□ 0.52
GJA1P17302 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GJA1P17302 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GJA1P17302 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GJA1P17302 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GJA1P17302 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GJA1P17302 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
GJA1P17302 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms