Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1AP08908 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HTR1AP08908 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1AP08908 AC132938.6-201ENST00000623828 1655 ntBASIC16.21■□□□□ 0.18
HTR1AP08908 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1AP08908 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
HTR1AP08908 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.21■□□□□ 0.18
HTR1AP08908 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1AP08908 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HTR1AP08908 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR1AP08908 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HTR1AP08908 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HTR1AP08908 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 HLA-L-209ENST00000420110 1011 ntBASIC16.2■□□□□ 0.18
HTR1AP08908 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 AC090192.1-201ENST00000517740 490 ntBASIC16.2■□□□□ 0.18
HTR1AP08908 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.2■□□□□ 0.18
HTR1AP08908 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.2■□□□□ 0.18
HTR1AP08908 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.2■□□□□ 0.18
HTR1AP08908 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HTR1AP08908 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HTR1AP08908 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
HTR1AP08908 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HTR1AP08908 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 AC006449.5-201ENST00000610658 2098 ntBASIC16.19■□□□□ 0.18
HTR1AP08908 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HTR1AP08908 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 ESRRAP1-201ENST00000400596 1257 ntBASIC16.19■□□□□ 0.18
HTR1AP08908 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 AC008040.2-201ENST00000461049 708 ntBASIC16.19■□□□□ 0.18
HTR1AP08908 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR1AP08908 AC130371.2-201ENST00000619443 611 ntBASIC16.19■□□□□ 0.18
HTR1AP08908 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.19■□□□□ 0.18
HTR1AP08908 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.19■□□□□ 0.18
HTR1AP08908 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.19■□□□□ 0.18
HTR1AP08908 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
HTR1AP08908 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HTR1AP08908 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.19■□□□□ 0.18
HTR1AP08908 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 AL024508.2-201ENST00000607749 1894 ntBASIC16.18■□□□□ 0.18
HTR1AP08908 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HTR1AP08908 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR1AP08908 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 GPAT2P1-201ENST00000444924 1672 ntBASIC16.18■□□□□ 0.18
HTR1AP08908 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HTR1AP08908 AC116353.5-201ENST00000638148 1699 ntBASIC16.18■□□□□ 0.18
HTR1AP08908 AC007950.2-201ENST00000615045 2347 ntBASIC16.18■□□□□ 0.18
HTR1AP08908 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HTR1AP08908 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HTR1AP08908 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.18■□□□□ 0.18
HTR1AP08908 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR1AP08908 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.18■□□□□ 0.18
HTR1AP08908 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HTR1AP08908 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms