Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 AC140113.3-201ENST00000605663 199 ntBASIC16.63■□□□□ 0.25
AP3D1O14617 AC139887.4-201ENST00000607877 719 ntBASIC16.63■□□□□ 0.25
AP3D1O14617 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3D1O14617 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP3D1O14617 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3D1O14617 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
AP3D1O14617 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 AC073508.3-201ENST00000619697 1419 ntBASIC16.62■□□□□ 0.25
AP3D1O14617 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
AP3D1O14617 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3D1O14617 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.62■□□□□ 0.25
AP3D1O14617 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.62■□□□□ 0.25
AP3D1O14617 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
AP3D1O14617 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 AC011558.1-201ENST00000623459 338 ntBASIC16.62■□□□□ 0.25
AP3D1O14617 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 AC022898.2-201ENST00000616822 1312 ntBASIC16.62■□□□□ 0.25
AP3D1O14617 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
AP3D1O14617 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3D1O14617 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
AP3D1O14617 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.62■□□□□ 0.25
AP3D1O14617 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3D1O14617 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 SIRPAP1-201ENST00000448467 1770 ntBASIC16.61■□□□□ 0.25
AP3D1O14617 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
AP3D1O14617 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.61■□□□□ 0.25
AP3D1O14617 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 PVRIG2P-201ENST00000435460 978 ntBASIC16.61■□□□□ 0.25
AP3D1O14617 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 DUTP2-201ENST00000519164 463 ntBASIC16.61■□□□□ 0.25
AP3D1O14617 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP3D1O14617 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP3D1O14617 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.61■□□□□ 0.25
AP3D1O14617 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP3D1O14617 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP3D1O14617 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.6■□□□□ 0.25
AP3D1O14617 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms