Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 GUSBP5-201ENST00000418136 578 ntBASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TRBV20-1A0A075B6N2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRBV20-1A0A075B6N2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRBV20-1A0A075B6N2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRBV20-1A0A075B6N2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AC060834.1-201ENST00000443027 2032 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 PTCHD3P2-201ENST00000424937 1205 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AC023632.3-201ENST00000521633 145 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AC068587.9-201ENST00000641814 219 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AL009178.2-201ENST00000597278 2719 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 RCC2P6-201ENST00000526625 1557 ntBASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV20-1A0A075B6N2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.82□□□□□ -0.52
TRBV20-1A0A075B6N2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms