Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 HMGA1P5-201ENST00000412453 271 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 AL023803.3-201ENST00000615559 522 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 AC103702.1-201ENST00000548801 2630 ntBASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 AC092338.2-201ENST00000568827 1415 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 PCDHA1-201ENST00000378133 2726 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 AL023806.1-201ENST00000603994 1649 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 AL137013.1-201ENST00000432946 1228 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 AP003041.3-201ENST00000527151 707 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
R3HCC1Q9Y3T6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 LINC02199-201ENST00000506655 2702 ntBASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 AC093677.2-201ENST00000600169 1863 ntBASIC20.35■□□□□ 0.85
R3HCC1Q9Y3T6 LINC00602-201ENST00000629776 2065 ntBASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3HCC1Q9Y3T6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms