Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC004790.2-201ENST00000623588 572 ntBASIC23.08■■□□□ 1.29
SPG7Q9UQ90 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 BX323043.1-201ENST00000641006 1765 ntBASIC23.08■■□□□ 1.29
SPG7Q9UQ90 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPG7Q9UQ90 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPG7Q9UQ90 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.08■■□□□ 1.28
SPG7Q9UQ90 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPG7Q9UQ90 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 AC027796.2-201ENST00000575326 344 ntBASIC23.07■■□□□ 1.28
SPG7Q9UQ90 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 TNXA-203ENST00000507684 2038 ntBASIC23.07■■□□□ 1.28
SPG7Q9UQ90 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 AC100803.2-201ENST00000562459 1963 ntBASIC23.07■■□□□ 1.28
SPG7Q9UQ90 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SPG7Q9UQ90 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 AC004408.2-201ENST00000623613 2777 ntBASIC23.06■■□□□ 1.28
SPG7Q9UQ90 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 IGHV3-52-201ENST00000519770 353 ntBASIC23.06■■□□□ 1.28
SPG7Q9UQ90 AC018845.2-201ENST00000568326 409 ntBASIC23.06■■□□□ 1.28
SPG7Q9UQ90 AL355385.1-201ENST00000606123 409 ntBASIC23.06■■□□□ 1.28
SPG7Q9UQ90 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 AL805961.1-202ENST00000641562 540 ntBASIC23.06■■□□□ 1.28
SPG7Q9UQ90 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SPG7Q9UQ90 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.05■■□□□ 1.28
SPG7Q9UQ90 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 HMGN1P19-201ENST00000436976 333 ntBASIC23.05■■□□□ 1.28
SPG7Q9UQ90 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SPG7Q9UQ90 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms