Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MS4A6AQ9H2W1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 AL359075.1-203ENST00000462729 1002 ntBASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 KRT18P21-201ENST00000515767 1272 ntBASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MS4A6AQ9H2W1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 AL391807.1-203ENST00000604392 2365 ntBASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 AL136038.4-201ENST00000603606 1261 ntBASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MS4A6AQ9H2W1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MS4A6AQ9H2W1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MS4A6AQ9H2W1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MS4A6AQ9H2W1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms