Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZNF133-202ENST00000360010 481 ntTSL 59.03□□□□□ -0.963e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-208ENST00000434018 523 ntTSL 38.53□□□□□ -1.043e-10■■□□□ 13.6
CSTF2TQ9H0L4 NPIPP1-203ENST00000547107 1071 ntBASIC7.24□□□□□ -1.253e-10■■□□□ 13.6
CSTF2TQ9H0L4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.23e-6■■□□□ 13.6
CSTF2TQ9H0L4 NFATC3-210ENST00000562171 707 ntTSL 319.76■□□□□ 0.754e-7■■□□□ 13.6
CSTF2TQ9H0L4 ARHGEF1-221ENST00000600387 2272 ntTSL 317.67■□□□□ 0.425e-7■■□□□ 13.6
CSTF2TQ9H0L4 TSPAN4-212ENST00000494815 2187 ntTSL 216.71■□□□□ 0.274e-7■■□□□ 13.6
CSTF2TQ9H0L4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.154e-7■■□□□ 13.6
CSTF2TQ9H0L4 NFATC3-206ENST00000539828 2484 ntTSL 215.45■□□□□ 0.064e-7■■□□□ 13.6
CSTF2TQ9H0L4 ARHGEF1-214ENST00000596957 570 ntTSL 313.83□□□□□ -0.25e-7■■□□□ 13.6
CSTF2TQ9H0L4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.77□□□□□ -0.24e-7■■□□□ 13.6
CSTF2TQ9H0L4 RERE-215ENST00000492766 367 ntTSL 312.61□□□□□ -0.394e-7■■□□□ 13.6
CSTF2TQ9H0L4 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.511e-13■■□□□ 13.6
CSTF2TQ9H0L4 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)10.97□□□□□ -0.651e-13■■□□□ 13.6
CSTF2TQ9H0L4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.291e-6■■□□□ 13.6
CSTF2TQ9H0L4 GAS6-205ENST00000610073 2169 ntTSL 219.22■□□□□ 0.673e-7■■□□□ 13.5
CSTF2TQ9H0L4 ZNF621-207ENST00000490457 916 ntTSL 314.34□□□□□ -0.111e-6■■□□□ 13.5
CSTF2TQ9H0L4 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.9□□□□□ -0.51e-6■■□□□ 13.5
CSTF2TQ9H0L4 NR5A1-201ENST00000373587 768 ntTSL 317.64■□□□□ 0.419e-7■■□□□ 13.5
CSTF2TQ9H0L4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.374e-12■■□□□ 13.5
CSTF2TQ9H0L4 STPG4-206ENST00000422269 983 ntTSL 29.97□□□□□ -0.813e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)27.3■■□□□ 1.967e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-202ENST00000511203 1880 ntTSL 226.79■■□□□ 1.887e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.117e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)12.37□□□□□ -0.437e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-205ENST00000527366 435 ntTSL 311.89□□□□□ -0.517e-8■■□□□ 13.5
CSTF2TQ9H0L4 H2AFZ-206ENST00000529158 726 ntTSL 39.53□□□□□ -0.887e-8■■□□□ 13.5
CSTF2TQ9H0L4 ABHD17A-206ENST00000592757 740 ntTSL 318.29■□□□□ 0.522e-7■■□□□ 13.5
CSTF2TQ9H0L4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.313e-8■■□□□ 13.5
CSTF2TQ9H0L4 TANGO2-222ENST00000479679 894 ntTSL 222.47■■□□□ 1.194e-7■■□□□ 13.5
CSTF2TQ9H0L4 NEK6-206ENST00000422297 799 ntTSL 313.36□□□□□ -0.271e-6■■□□□ 13.5
CSTF2TQ9H0L4 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC11.6□□□□□ -0.551e-6■■□□□ 13.5
CSTF2TQ9H0L4 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC11.56□□□□□ -0.561e-6■■□□□ 13.5
CSTF2TQ9H0L4 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.841e-6■■□□□ 13.5
CSTF2TQ9H0L4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.69■■□□□ 1.861e-6■■□□□ 13.5
CSTF2TQ9H0L4 LINC01089-212ENST00000545885 559 ntTSL 29.04□□□□□ -0.961e-6■■□□□ 13.5
CSTF2TQ9H0L4 PKP4-209ENST00000479398 550 ntTSL 519.37■□□□□ 0.693e-8■■□□□ 13.5
CSTF2TQ9H0L4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.05■□□□□ 0.84e-10■■□□□ 13.5
CSTF2TQ9H0L4 SDC1-205ENST00000447124 591 ntTSL 419.53■□□□□ 0.721e-6■■□□□ 13.5
CSTF2TQ9H0L4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.241e-6■■□□□ 13.5
CSTF2TQ9H0L4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.211e-6■■□□□ 13.5
CSTF2TQ9H0L4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-208ENST00000466117 542 ntTSL 414.72□□□□□ -0.052e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.242e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-204ENST00000411679 555 ntTSL 513.05□□□□□ -0.322e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-206ENST00000457534 555 ntTSL 512.33□□□□□ -0.442e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-205ENST00000436674 3667 ntTSL 1 (best)12□□□□□ -0.492e-6■■□□□ 13.5
CSTF2TQ9H0L4 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.592e-6■■□□□ 13.5
CSTF2TQ9H0L4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51e-6■■□□□ 13.5
CSTF2TQ9H0L4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.154e-7■■□□□ 13.5
CSTF2TQ9H0L4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.144e-7■■□□□ 13.5
CSTF2TQ9H0L4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.882e-6■■□□□ 13.5
CSTF2TQ9H0L4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.112e-6■■□□□ 13.5
CSTF2TQ9H0L4 SUN1-207ENST00000419312 473 ntTSL 415□□□□□ -0.018e-7■■□□□ 13.5
CSTF2TQ9H0L4 SUN1-218ENST00000450881 513 ntTSL 413.47□□□□□ -0.258e-7■■□□□ 13.5
CSTF2TQ9H0L4 SUN1-234ENST00000493681 526 ntTSL 311.64□□□□□ -0.558e-7■■□□□ 13.5
CSTF2TQ9H0L4 SUN1-228ENST00000471349 569 ntTSL 45.53□□□□□ -1.528e-7■■□□□ 13.5
CSTF2TQ9H0L4 AL121845.2-202ENST00000476221 446 ntTSL 516.69■□□□□ 0.268e-12■■□□□ 13.4
CSTF2TQ9H0L4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.18e-12■■□□□ 13.4
CSTF2TQ9H0L4 AL157400.5-201ENST00000507624 621 ntBASIC22.96■■□□□ 1.274e-10■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-208ENST00000578473 2482 ntTSL 1 (best)19.39■□□□□ 0.693e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.95■□□□□ 0.623e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-218ENST00000583881 1561 ntTSL 218.65■□□□□ 0.583e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-215ENST00000581969 568 ntTSL 418.64■□□□□ 0.573e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.563e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-212ENST00000580492 553 ntTSL 518.48■□□□□ 0.553e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.46■□□□□ 0.553e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-216ENST00000582710 846 ntTSL 518.39■□□□□ 0.533e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-206ENST00000577509 1912 ntTSL 218.21■□□□□ 0.513e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-207ENST00000577932 572 ntTSL 217.62■□□□□ 0.413e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.59■□□□□ 0.413e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-209ENST00000579482 2157 ntTSL 217.48■□□□□ 0.393e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-211ENST00000579893 558 ntTSL 416.87■□□□□ 0.293e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.84■□□□□ 0.293e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-210ENST00000579543 558 ntTSL 416.69■□□□□ 0.263e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.68■□□□□ 0.263e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.243e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.54■□□□□ 0.243e-7■■□□□ 13.4
CSTF2TQ9H0L4 FDXR-213ENST00000581219 567 ntTSL 415.75■□□□□ 0.113e-7■■□□□ 13.4
CSTF2TQ9H0L4 AHCTF1-205ENST00000478568 611 ntTSL 415.72■□□□□ 0.113e-7■■□□□ 13.4
CSTF2TQ9H0L4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-13■■□□□ 13.4
CSTF2TQ9H0L4 MICAL3-211ENST00000498345 538 ntTSL 411.6□□□□□ -0.553e-7■■□□□ 13.4
CSTF2TQ9H0L4 MICAL3-209ENST00000465886 559 ntTSL 411.58□□□□□ -0.563e-7■■□□□ 13.4
CSTF2TQ9H0L4 MICAL3-208ENST00000462645 572 ntTSL 410.14□□□□□ -0.793e-7■■□□□ 13.4
CSTF2TQ9H0L4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.114e-8■■□□□ 13.4
CSTF2TQ9H0L4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.491e-7■■□□□ 13.4
CSTF2TQ9H0L4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.341e-11■■□□□ 13.4
CSTF2TQ9H0L4 ZNF503-AS2-206ENST00000527641 560 ntTSL 415.8■□□□□ 0.122e-6■■□□□ 13.4
CSTF2TQ9H0L4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.02■□□□□ 0.314e-8■■□□□ 13.4
CSTF2TQ9H0L4 SDC2-205ENST00000520233 563 ntTSL 416.31■□□□□ 0.24e-8■■□□□ 13.4
CSTF2TQ9H0L4 SDC2-203ENST00000519587 557 ntTSL 412.99□□□□□ -0.334e-8■■□□□ 13.4
CSTF2TQ9H0L4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.334e-8■■□□□ 13.4
CSTF2TQ9H0L4 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.89□□□□□ -0.994e-8■■□□□ 13.4
CSTF2TQ9H0L4 WDR1-209ENST00000505851 715 ntTSL 220.6■□□□□ 0.894e-7■■□□□ 13.4
CSTF2TQ9H0L4 WDR1-216ENST00000514319 719 ntTSL 512.93□□□□□ -0.344e-7■■□□□ 13.4
CSTF2TQ9H0L4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.352e-7■■□□□ 13.4
CSTF2TQ9H0L4 ACSF3-213ENST00000542688 2024 ntTSL 516.63■□□□□ 0.252e-7■■□□□ 13.4
CSTF2TQ9H0L4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.062e-7■■□□□ 13.4
CSTF2TQ9H0L4 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.492e-7■■□□□ 13.4
CSTF2TQ9H0L4 ACSF3-206ENST00000537116 2496 ntTSL 211.56□□□□□ -0.562e-7■■□□□ 13.4
Retrieved 100 of 19,151 protein–RNA pairs in 206.2 ms