RNA–Protein interactions for RNA: ENST00000537116.5

ACSF3-206, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 2

Gene ACSF3, Length 2,496 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-206ENST00000537116 NISCHQ9Y2I1 1504 aa25.21■■□□□ 1.63
ACSF3-206ENST00000537116 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
ACSF3-206ENST00000537116 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
ACSF3-206ENST00000537116 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
ACSF3-206ENST00000537116 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
ACSF3-206ENST00000537116 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
ACSF3-206ENST00000537116 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
ACSF3-206ENST00000537116 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.88
ACSF3-206ENST00000537116 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
ACSF3-206ENST00000537116 HRCP23327 699 aa20.33■□□□□ 0.85
ACSF3-206ENST00000537116 ABCC9O60706 1549 aa20.26■□□□□ 0.83
ACSF3-206ENST00000537116 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
ACSF3-206ENST00000537116 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
ACSF3-206ENST00000537116 RB1CC1Q8TDY2 1594 aa19.88■□□□□ 0.77
ACSF3-206ENST00000537116 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
ACSF3-206ENST00000537116 NACADO15069 1562 aa19.8■□□□□ 0.76
ACSF3-206ENST00000537116 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
ACSF3-206ENST00000537116 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
ACSF3-206ENST00000537116 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.75
ACSF3-206ENST00000537116 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
ACSF3-206ENST00000537116 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
ACSF3-206ENST00000537116 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
ACSF3-206ENST00000537116 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
ACSF3-206ENST00000537116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
ACSF3-206ENST00000537116 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
ACSF3-206ENST00000537116 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
ACSF3-206ENST00000537116 WIZO95785 1651 aa19.39■□□□□ 0.69
ACSF3-206ENST00000537116 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
ACSF3-206ENST00000537116 MYT1Q01538 1121 aa19.2■□□□□ 0.66
ACSF3-206ENST00000537116 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
ACSF3-206ENST00000537116 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
ACSF3-206ENST00000537116 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
ACSF3-206ENST00000537116 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
ACSF3-206ENST00000537116 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
ACSF3-206ENST00000537116 EEA1Q15075 1411 aa19.07■□□□□ 0.64
ACSF3-206ENST00000537116 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
ACSF3-206ENST00000537116 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
ACSF3-206ENST00000537116 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
ACSF3-206ENST00000537116 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
ACSF3-206ENST00000537116 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
ACSF3-206ENST00000537116 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
ACSF3-206ENST00000537116 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
ACSF3-206ENST00000537116 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
ACSF3-206ENST00000537116 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
ACSF3-206ENST00000537116 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
ACSF3-206ENST00000537116 SOGA1O94964 1423 aa18.8■□□□□ 0.6
ACSF3-206ENST00000537116 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
ACSF3-206ENST00000537116 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.59
ACSF3-206ENST00000537116 KIF21BO75037 1637 aa18.77■□□□□ 0.59
ACSF3-206ENST00000537116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
ACSF3-206ENST00000537116 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
ACSF3-206ENST00000537116 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
ACSF3-206ENST00000537116 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
ACSF3-206ENST00000537116 SYNJ1O43426 1573 aa18.62■□□□□ 0.57
ACSF3-206ENST00000537116 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
ACSF3-206ENST00000537116 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
ACSF3-206ENST00000537116 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
ACSF3-206ENST00000537116 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
ACSF3-206ENST00000537116 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
ACSF3-206ENST00000537116 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
ACSF3-206ENST00000537116 CLIP1P30622 1438 aa18.52■□□□□ 0.55
ACSF3-206ENST00000537116 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
ACSF3-206ENST00000537116 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
ACSF3-206ENST00000537116 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.54
ACSF3-206ENST00000537116 ZNF316A6NFI3 1004 aaPredicted RBP18.45■□□□□ 0.54
ACSF3-206ENST00000537116 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
ACSF3-206ENST00000537116 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
ACSF3-206ENST00000537116 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
ACSF3-206ENST00000537116 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
ACSF3-206ENST00000537116 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
ACSF3-206ENST00000537116 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
ACSF3-206ENST00000537116 APLP2Q06481 763 aa18.29■□□□□ 0.52
ACSF3-206ENST00000537116 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.51
ACSF3-206ENST00000537116 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
ACSF3-206ENST00000537116 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
ACSF3-206ENST00000537116 CUX2O14529 1486 aa18.19■□□□□ 0.5
ACSF3-206ENST00000537116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
ACSF3-206ENST00000537116 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
ACSF3-206ENST00000537116 CUX1P39880 1505 aa18.17■□□□□ 0.5
ACSF3-206ENST00000537116 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
ACSF3-206ENST00000537116 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
ACSF3-206ENST00000537116 CFTRP13569 1480 aa18.14■□□□□ 0.49
ACSF3-206ENST00000537116 CC2D2AQ9P2K1 1620 aa18.14■□□□□ 0.49
ACSF3-206ENST00000537116 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
ACSF3-206ENST00000537116 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
ACSF3-206ENST00000537116 MIER1Q8N108 512 aa18.07■□□□□ 0.48
ACSF3-206ENST00000537116 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
ACSF3-206ENST00000537116 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
ACSF3-206ENST00000537116 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
ACSF3-206ENST00000537116 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
ACSF3-206ENST00000537116 YTHDC1Q96MU7 727 aaKnown RBP17.91■□□□□ 0.46
ACSF3-206ENST00000537116 IGF1RP08069 1367 aa17.88■□□□□ 0.45
ACSF3-206ENST00000537116 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
ACSF3-206ENST00000537116 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
ACSF3-206ENST00000537116 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
ACSF3-206ENST00000537116 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
ACSF3-206ENST00000537116 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.44
ACSF3-206ENST00000537116 MAPKBP1O60336 1514 aa17.83■□□□□ 0.44
ACSF3-206ENST00000537116 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
ACSF3-206ENST00000537116 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms