Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL049597.2-201ENST00000565575 961 ntBASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 RNF126P1-202ENST00000569893 925 ntBASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 Z83836.1-201ENST00000624605 1642 ntBASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TTC9CQ8N5M4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 MTCL1P1-201ENST00000446207 792 ntBASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TTC9CQ8N5M4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 LINC00896-202ENST00000609602 2128 ntBASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 GUSBP12-201ENST00000513727 720 ntBASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 CROCCP1-201ENST00000426910 5675 ntBASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 KRT8P47-201ENST00000604727 1398 ntBASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TTC9CQ8N5M4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms