Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 Z83836.1-201ENST00000624605 1642 ntBASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 AL031598.1-201ENST00000561511 1773 ntBASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 AC009053.2-201ENST00000563701 2365 ntBASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP1BQ7LBR1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AC005332.3-201ENST00000589904 676 ntBASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 GPR32P1-201ENST00000601788 811 ntBASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP1BQ7LBR1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
CHMP1BQ7LBR1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP1BQ7LBR1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.39■□□□□ 0.22
CHMP1BQ7LBR1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP1BQ7LBR1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 GUSBP12-201ENST00000513727 720 ntBASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 IGHV3-41-201ENST00000613121 348 ntBASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 KRT89P-201ENST00000620027 1478 ntBASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP1BQ7LBR1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 AL499627.1-201ENST00000569373 2188 ntBASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 CHCHD2P8-201ENST00000429873 447 ntBASIC16.38■□□□□ 0.21
CHMP1BQ7LBR1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms