Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.38□□□□□ -0.27
HIST1H2BDP58876 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H2BDP58876 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 AC022532.1-201ENST00000624563 1728 ntBASIC13.37□□□□□ -0.27
HIST1H2BDP58876 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 KRT18P20-201ENST00000548986 1279 ntBASIC13.37□□□□□ -0.27
HIST1H2BDP58876 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H2BDP58876 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 AL359258.3-201ENST00000622910 2331 ntBASIC13.36□□□□□ -0.27
HIST1H2BDP58876 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 TPRG1LP1-201ENST00000598702 760 ntBASIC13.36□□□□□ -0.27
HIST1H2BDP58876 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HIST1H2BDP58876 AC105020.6-201ENST00000621523 1217 ntBASIC13.36□□□□□ -0.27
HIST1H2BDP58876 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms