Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 AC132938.6-201ENST00000623828 1655 ntBASIC17.04■□□□□ 0.32
CCKBRP32239 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCKBRP32239 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.04■□□□□ 0.32
CCKBRP32239 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCKBRP32239 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.04■□□□□ 0.32
CCKBRP32239 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 AC005104.2-201ENST00000427818 678 ntBASIC17.04■□□□□ 0.32
CCKBRP32239 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 KRT18P3-201ENST00000451602 1288 ntBASIC17.04■□□□□ 0.32
CCKBRP32239 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.04■□□□□ 0.32
CCKBRP32239 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 AC073592.4-201ENST00000623827 446 ntBASIC17.04■□□□□ 0.32
CCKBRP32239 AL022326.1-202ENST00000641533 845 ntBASIC17.04■□□□□ 0.32
CCKBRP32239 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CCKBRP32239 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.04■□□□□ 0.32
CCKBRP32239 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCKBRP32239 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCKBRP32239 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCKBRP32239 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCKBRP32239 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 PMPCAP1-201ENST00000508114 1576 ntBASIC17.03■□□□□ 0.32
CCKBRP32239 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.03■□□□□ 0.32
CCKBRP32239 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.03■□□□□ 0.32
CCKBRP32239 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.03■□□□□ 0.32
CCKBRP32239 UNC93B6-202ENST00000528242 690 ntBASIC17.03■□□□□ 0.32
CCKBRP32239 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.03■□□□□ 0.32
CCKBRP32239 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCKBRP32239 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
CCKBRP32239 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CCKBRP32239 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCKBRP32239 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.03■□□□□ 0.32
CCKBRP32239 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCKBRP32239 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCKBRP32239 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCKBRP32239 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCKBRP32239 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CCKBRP32239 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCKBRP32239 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCKBRP32239 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCKBRP32239 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.02■□□□□ 0.32
CCKBRP32239 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCKBRP32239 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.02■□□□□ 0.32
CCKBRP32239 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.02■□□□□ 0.32
CCKBRP32239 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.02■□□□□ 0.32
CCKBRP32239 AC040169.1-201ENST00000565382 521 ntBASIC17.02■□□□□ 0.32
CCKBRP32239 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.02■□□□□ 0.32
CCKBRP32239 NEFHP1-201ENST00000412845 2629 ntBASIC17.02■□□□□ 0.32
CCKBRP32239 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCKBRP32239 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
CCKBRP32239 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCKBRP32239 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCKBRP32239 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CCKBRP32239 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.02■□□□□ 0.31
CCKBRP32239 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCKBRP32239 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms