Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.34■□□□□ 0.85
GADD45BO75293 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GADD45BO75293 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.33■□□□□ 0.85
GADD45BO75293 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.33■□□□□ 0.85
GADD45BO75293 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.33■□□□□ 0.85
GADD45BO75293 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GADD45BO75293 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.33■□□□□ 0.85
GADD45BO75293 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
GADD45BO75293 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
GADD45BO75293 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.33■□□□□ 0.84
GADD45BO75293 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
GADD45BO75293 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
GADD45BO75293 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GADD45BO75293 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GADD45BO75293 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GADD45BO75293 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.32■□□□□ 0.84
GADD45BO75293 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.32■□□□□ 0.84
GADD45BO75293 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.32■□□□□ 0.84
GADD45BO75293 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.32■□□□□ 0.84
GADD45BO75293 AC010653.2-201ENST00000623505 997 ntBASIC20.32■□□□□ 0.84
GADD45BO75293 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.32■□□□□ 0.84
GADD45BO75293 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 AC005915.1-201ENST00000624912 2018 ntBASIC20.32■□□□□ 0.84
GADD45BO75293 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GADD45BO75293 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.32■□□□□ 0.84
GADD45BO75293 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GADD45BO75293 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.32■□□□□ 0.84
GADD45BO75293 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GADD45BO75293 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GADD45BO75293 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
GADD45BO75293 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.31■□□□□ 0.84
GADD45BO75293 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
GADD45BO75293 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.31■□□□□ 0.84
GADD45BO75293 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.31■□□□□ 0.84
GADD45BO75293 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GADD45BO75293 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
GADD45BO75293 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
GADD45BO75293 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GADD45BO75293 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GADD45BO75293 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GADD45BO75293 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GADD45BO75293 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GADD45BO75293 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GADD45BO75293 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GADD45BO75293 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GADD45BO75293 AC116353.5-201ENST00000638148 1699 ntBASIC20.3■□□□□ 0.84
GADD45BO75293 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.3■□□□□ 0.84
GADD45BO75293 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms