Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDLIM7Q9NR12 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AC120498.9-201ENST00000339021 3867 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 ABALON-201ENST00000629058 1903 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AP000997.3-201ENST00000623333 2250 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AC135050.7-201ENST00000624508 2218 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 KRT18P27-201ENST00000427733 1299 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 MIR4469-201ENST00000583919 79 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 AL354751.1-201ENST00000412768 1863 ntBASIC19.82■□□□□ 0.76
PDLIM7Q9NR12 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 HTR5BP-201ENST00000430851 1154 ntBASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 KRT18P2-201ENST00000447938 1258 ntBASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 BX005266.1-201ENST00000473402 457 ntBASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 AC108751.1-201ENST00000490852 363 ntBASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 MIR1199-201ENST00000621445 119 ntBASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM7Q9NR12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 AC254562.1-201ENST00000417586 456 ntBASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 FAM8A3P-201ENST00000427218 844 ntBASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 AC005593.1-201ENST00000624894 515 ntBASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM7Q9NR12 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms