Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.358e-7■■□□□ 13.7
CSTF2TQ9H0L4 PPP2R2D-206ENST00000517472 573 ntTSL 34.6□□□□□ -1.678e-13■■□□□ 13.7
CSTF2TQ9H0L4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.89■□□□□ 0.452e-6■■□□□ 13.7
CSTF2TQ9H0L4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.42e-6■■□□□ 13.7
CSTF2TQ9H0L4 RERE-208ENST00000465125 396 ntTSL 522.53■■□□□ 1.22e-7■■□□□ 13.7
CSTF2TQ9H0L4 RERE-214ENST00000488215 962 ntTSL 39.22□□□□□ -0.932e-7■■□□□ 13.7
CSTF2TQ9H0L4 RERE-207ENST00000464972 743 ntTSL 57.83□□□□□ -1.162e-7■■□□□ 13.7
CSTF2TQ9H0L4 ANP32A-205ENST00000483221 420 ntTSL 313.27□□□□□ -0.296e-9■■□□□ 13.7
CSTF2TQ9H0L4 GNG7-202ENST00000587867 723 ntTSL 58.98□□□□□ -0.974e-6■■□□□ 13.6
CSTF2TQ9H0L4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.11e-6■■□□□ 13.6
CSTF2TQ9H0L4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.161e-6■■□□□ 13.6
CSTF2TQ9H0L4 ANKRD10-210ENST00000494859 705 ntTSL 527.78■■■□□ 2.045e-7■■□□□ 13.6
CSTF2TQ9H0L4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.9■□□□□ 0.625e-7■■□□□ 13.6
CSTF2TQ9H0L4 ANKRD10-206ENST00000465753 997 ntTSL 1 (best)17.9■□□□□ 0.465e-7■■□□□ 13.6
CSTF2TQ9H0L4 ANKRD10-203ENST00000460846 535 ntTSL 312.2□□□□□ -0.465e-7■■□□□ 13.6
CSTF2TQ9H0L4 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC11.77□□□□□ -0.532e-6■■□□□ 13.6
CSTF2TQ9H0L4 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC11.65□□□□□ -0.541e-7■■□□□ 13.6
CSTF2TQ9H0L4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.04■■□□□ 1.922e-7■■□□□ 13.6
CSTF2TQ9H0L4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.124e-9■■□□□ 13.6
CSTF2TQ9H0L4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.484e-9■■□□□ 13.6
CSTF2TQ9H0L4 CDC42-205ENST00000498236 816 ntTSL 57.35□□□□□ -1.234e-9■■□□□ 13.6
CSTF2TQ9H0L4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.29□□□□□ -1.244e-9■■□□□ 13.6
CSTF2TQ9H0L4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.447e-9■■□□□ 13.6
CSTF2TQ9H0L4 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.747e-9■■□□□ 13.6
CSTF2TQ9H0L4 ARID1A-216ENST00000637465 699 ntTSL 54.18□□□□□ -1.747e-9■■□□□ 13.6
CSTF2TQ9H0L4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.227e-9■■□□□ 13.6
CSTF2TQ9H0L4 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)24.01■■□□□ 1.432e-7■■□□□ 13.6
CSTF2TQ9H0L4 ABCC3-213ENST00000513589 582 ntTSL 412.04□□□□□ -0.483e-7■■□□□ 13.6
CSTF2TQ9H0L4 CERS2-203ENST00000361419 997 ntTSL 228.54■■■□□ 2.162e-7■■□□□ 13.6
CSTF2TQ9H0L4 CERS2-202ENST00000345896 2170 ntTSL 227.11■■□□□ 1.932e-7■■□□□ 13.6
CSTF2TQ9H0L4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.62e-7■■□□□ 13.6
CSTF2TQ9H0L4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.342e-7■■□□□ 13.6
CSTF2TQ9H0L4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.2■□□□□ 0.661e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-211ENST00000528860 1499 ntTSL 214.04□□□□□ -0.161e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.68□□□□□ -0.221e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.64□□□□□ -0.391e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.56□□□□□ -0.41e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-204ENST00000422941 3018 ntTSL 2 BASIC10.4□□□□□ -0.741e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-203ENST00000397310 2719 ntTSL 29.92□□□□□ -0.821e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-201ENST00000316902 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.891e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-202ENST00000339733 3066 ntTSL 1 (best)7.99□□□□□ -1.131e-7■■□□□ 13.6
CSTF2TQ9H0L4 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.91□□□□□ -1.141e-7■■□□□ 13.6
CSTF2TQ9H0L4 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.42□□□□□ -1.221e-7■■□□□ 13.6
CSTF2TQ9H0L4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.45□□□□□ -1.541e-7■■□□□ 13.6
CSTF2TQ9H0L4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.621e-7■■□□□ 13.6
CSTF2TQ9H0L4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.91□□□□□ -1.621e-7■■□□□ 13.6
CSTF2TQ9H0L4 MIR126-201ENST00000362291 85 ntBASIC2.81□□□□□ -1.961e-7■■□□□ 13.6
CSTF2TQ9H0L4 PAM16-205ENST00000571986 606 ntTSL 316.28■□□□□ 0.22e-6■■□□□ 13.6
CSTF2TQ9H0L4 CORO7-PAM16-201ENST00000572274 672 ntTSL 515.09■□□□□ 0.012e-6■■□□□ 13.6
CSTF2TQ9H0L4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-6■■□□□ 13.6
CSTF2TQ9H0L4 PAM16-209ENST00000573614 650 ntTSL 514.19□□□□□ -0.142e-6■■□□□ 13.6
CSTF2TQ9H0L4 PAM16-202ENST00000571178 353 ntTSL 313.74□□□□□ -0.212e-6■■□□□ 13.6
CSTF2TQ9H0L4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.262e-6■■□□□ 13.6
CSTF2TQ9H0L4 SREBF1-211ENST00000476994 591 ntTSL 216.08■□□□□ 0.166e-8■■□□□ 13.6
CSTF2TQ9H0L4 SREBF1-222ENST00000583732 580 ntTSL 414.4□□□□□ -0.16e-8■■□□□ 13.6
CSTF2TQ9H0L4 CPZ-205ENST00000506287 906 ntTSL 320.26■□□□□ 0.839e-7■■□□□ 13.6
CSTF2TQ9H0L4 CPZ-207ENST00000514602 692 ntTSL 219.93■□□□□ 0.789e-7■■□□□ 13.6
CSTF2TQ9H0L4 CPZ-204ENST00000504070 583 ntTSL 418.14■□□□□ 0.499e-7■■□□□ 13.6
CSTF2TQ9H0L4 CPZ-208ENST00000514875 597 ntTSL 315.43■□□□□ 0.069e-7■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-209ENST00000586481 578 ntTSL 318.69■□□□□ 0.585e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.8■□□□□ 0.445e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-210ENST00000586944 4661 ntTSL 216.11■□□□□ 0.175e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.075e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.6□□□□□ -0.075e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.175e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.38□□□□□ -0.275e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-214ENST00000589575 749 ntTSL 312.34□□□□□ -0.435e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-216ENST00000590887 642 ntTSL 311.75□□□□□ -0.535e-8■■□□□ 13.6
CSTF2TQ9H0L4 PTBP1-213ENST00000587191 357 ntTSL 510.83□□□□□ -0.685e-8■■□□□ 13.6
CSTF2TQ9H0L4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.19□□□□□ -0.33e-6■■□□□ 13.6
CSTF2TQ9H0L4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.393e-6■■□□□ 13.6
CSTF2TQ9H0L4 PRSS53-203ENST00000492427 1782 ntTSL 317.35■□□□□ 0.378e-7■■□□□ 13.6
CSTF2TQ9H0L4 KDELR2-204ENST00000462052 382 ntTSL 27.5□□□□□ -1.212e-7■■□□□ 13.6
CSTF2TQ9H0L4 SMAD9-204ENST00000483941 545 ntTSL 312.69□□□□□ -0.381e-6■■□□□ 13.6
CSTF2TQ9H0L4 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.61e-6■■□□□ 13.6
CSTF2TQ9H0L4 SMAD9-202ENST00000379826 5592 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.711e-6■■□□□ 13.6
CSTF2TQ9H0L4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.463e-11■■□□□ 13.6
CSTF2TQ9H0L4 CPED1-207ENST00000466055 543 ntTSL 35.38□□□□□ -1.554e-14■■□□□ 13.6
CSTF2TQ9H0L4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.34e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-211ENST00000485326 795 ntTSL 318.69■□□□□ 0.583e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.78■□□□□ 0.123e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.073e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-219ENST00000610810 577 ntTSL 514.19□□□□□ -0.143e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC10.71□□□□□ -0.693e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-216ENST00000497553 530 ntTSL 49.97□□□□□ -0.813e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.013e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-215ENST00000497355 1778 ntTSL 1 (best)7□□□□□ -1.293e-10■■□□□ 13.6
CSTF2TQ9H0L4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.59□□□□□ -1.353e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.91■□□□□ 0.33e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.27■□□□□ 0.193e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.163e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.153e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.76■□□□□ 0.113e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.043e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.293e-10■■□□□ 13.6
CSTF2TQ9H0L4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.74□□□□□ -0.373e-10■■□□□ 13.6
CSTF2TQ9H0L4 PKD1P6-NPIPP1-201ENST00000340301 547 ntTSL 511.75□□□□□ -0.533e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC11.16□□□□□ -0.623e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.753e-10■■□□□ 13.6
CSTF2TQ9H0L4 ZNF133-213ENST00000626025 616 ntTSL 59.7□□□□□ -0.863e-10■■□□□ 13.6
Retrieved 100 of 19,151 protein–RNA pairs in 180.7 ms